Job Description Q62415 Confidence 84.12% Date Tue Jul 30 13:16:45 BST 2013 Rank 350 Aligned Residues 199 % Identity 11% Template c2yfaA_ PDB info PDB header:receptor Chain: A: PDB Molecule:methyl-accepting chemotaxis transducer; PDBTitle: x-ray structure of mcps ligand binding domain in complex with malate Resolution 1.80 Å

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		116	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170				.	.
Predicted Secondary structure																																																									.	.	.
Query SS confidence																																																									.	.	.
Query Sequence		E	N	G	V	G	N	P	R	V	E	L	T	L	S	E	L	Q	D	M	A	A	R	Q	Q	Q	Q	I	E	N	Q	Q	Q	M	L	V	A	K	E	Q	R	L	H	F	L	K	Q	Q	E	R	R	Q	Q	Q	S	V	.	.	.	S	E
Query Conservation																																																									.	.	.
Alig confidence																			.																																						.	.	.
Template Conservation																			.
Template Sequence		S	H	M	G	D	I	G	Q	L	N	K	D	L	T	D	L	R	.	I	A	R	L	Q	Y	M	I	A	N	G	D	D	T	A	A	A	N	T	L	A	K	L	D	A	F	S	K	Q	Q	A	Y	L	A	T	T	F	K	S	P	E	N
Template Known Secondary structure																			.									T	T	T																												S
Template Predicted Secondary structure																			.
Template SS confidence
		48	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.		.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.
		173	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	E	K	L	Q	K	L	K	E	R	V	E	A	Q	E	N	K	L	K	K	I	R	A	M	R	G	Q	V	D	Y	S	K	I	M	N	G	N	L	S	A	E	I	E	R	F	S	A	M	F	Q	E	K	K	Q	E	V	Q	T	A	I
Query Conservation
Alig confidence
Template Conservation
Template Sequence		V	K	L	L	G	E	L	G	D	T	I	S	A	Y	K	L	S	L	N	K	M	R	Q	G	Y	D	A	T	R	A	A	R	V	S	M	D	S	S	A	I	R	A	D	Q	A	M	D	A	L	S	Q	E	V	M	A	R	P	E	A	D
Template Known Secondary structure																																																									S		S
Template Predicted Secondary structure
Template SS confidence
		107	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.
		233	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	R	V	D	Q	L	S	Q	Q	L	E	D	L	K	K	G	K	L	N	G	F	Q	S	Y	N	G	R	L	T	G	P	A	A	V	E	L	K	R	L	Y	Q	E	L	Q	I	R	N	Q	L	N	Q	E	Q	N	S	K	L	Q	Q	Q
Query Conservation
Alig confidence
Template Conservation
Template Sequence		S	V	R	L	A	Q	Y	Q	L	I	S	K	A	R	Q	Q	L	L	Q	V	R	I	D	V	R	G	Y	I	A	E	N	S	S	A	N	E	Q	A	A	L	R	Q	L	D	A	A	L	A	D	T	D	N	L	K	R	Q	L	P	S	E
Template Known Secondary structure																															S																												G	G	G
Template Predicted Secondary structure
Template SS confidence
		167	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.
		293	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	E	L	L	N	K	R	N	M	E	V	A	M	M	D	K	R	I	S	E	L	R	E
Query Conservation
Alig confidence
Template Conservation
Template Sequence		D	A	R	L	Q	Q	F	E	N	A	V	L	A	Y	R	D	A	V	R	Q	F	R	D
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		227	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions	Phyre2 is part of Genome3D