Job Description Q62415 Confidence 98.91% Date Tue Jul 30 13:16:45 BST 2013 Rank 250 Aligned Residues 237 % Identity 14% Template c2xkxB_ PDB info PDB header:structural protein Chain: B: PDB Molecule:disks large homolog 4; PDBTitle: single particle analysis of psd-95 in negative stain Resolution 22.9 Å

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		798	.	800	.	.	.	.	.	.	.	.	.	810	.	.	.	.	.	.	.	.	.	820	.	.	.	.	.	.	.	.	.	830	.	.	.	.	.	.	.	.	.	840	.	.	.	.	.	.	.	.	.	850	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	P	E	E	L	I	C	P	Q	T	T	H	Q	T	A	E	P	T	E	D	N	N	N	N	V	A	P	V	P	S	T	E	Q	I	P	S	P	V	A	E	A	P	S	E	E	D	Q	V	P	P	A	P	L	S	P	V	I	H	P	P
Query Conservation
Alig confidence
Template Conservation
Template Sequence		P	S	N	A	Y	L	S	D	S	Y	A	P	P	D	I	T	T	S	Y	S	Q	H	L	D	N	E	I	S	H	S	S	Y	L	G	T	D	Y	P	T	A	M	T	P	T	S	P	R	R	Y	S	P	V	A	K	D	L	L	G	E	E
Template Known Secondary structure			S		S	S	S			S	S	S		S				S	S	S	S							S						S		S	S	S								S	S	S				S			T	T	S	S		S	S
Template Predicted Secondary structure
Template SS confidence
		243	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.
		858	.	860	.	.	.	.	.	.	.	.	.	870	.	.	.	.	.	.	.	.	.	880	.	.	.	.	.	.	.	.	.	890	.	.	.	.	.	.	.	.	.	900	.	.	.	.	.	.	.	.	.	910	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	A	S	A	S	K	R	T	N	L	K	K	P	N	S	E	R	T	G	H	G	L	R	V	R	F	N	P	L	A	L	L	L	D	A	S	L	E	G	E	F	D	L	V	Q	R	I	I	Y	E	V	E	D	P	S	K	P	N	D	E
Query Conservation
Alig confidence
Template Conservation
Template Sequence		D	I	P	R	E	P	R	R	I	V	I	H	R	G	S	T	G	L	G	F	N	I	V	G	G	E	D	G	E	G	I	F	I	S	F	I	L	A	G	G	P	A	D	L	S	G	E	L	R	K	G	D	Q	I	L	S	V	N	G	V
Template Known Secondary structure						S									S	S	S										S	T	T										T	T	S						S				S	B							T	T
Template Predicted Secondary structure
Template SS confidence
		303	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.
		918	.	920	.	.	.	.	.	.	.	.	.	930	.	.	.	.	.	.	.	.	.	940	.	.	.	.	.	.	.	.	.	950	.	.	.	.	.	.	.	.	.	960	.	.	.	.	.	.	.	.	.	970	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	I	T	P	L	H	N	A	V	C	A	G	H	H	H	I	V	K	F	L	L	D	F	G	V	N	V	N	A	A	D	S	D	G	W	T	P	L	H	C	A	A	S	C	N	S	V	H	L	C	K	Q	L	V	E	S	G	A	A	I
Query Conservation
Alig confidence					.	.	.	.	.	.																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation					.	.	.	.	.	.																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		D	L	R	.	.	.	.	.	.	N	A	S	H	E	Q	A	A	I	A	L	K	N	A	G	Q	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	V	T	I	I	A	Q	Y	K	P	E	E
Template Known Secondary structure				T	.	.	.	.	.	.	T													T		S	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure					.	.	.	.	.	.																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		363	.	.							.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.																								.	.	.	.	.	.	.	390	.	.	.
		978	.	980	.	.	.	.	.	.	.	.	.	990	.	.	.	.	.	.	.	.	.	1000	.	.	.	.	.	.	.	.	.	1010	.	.	.	.	.	.	.	.	.	1020	.	.	.	.	.	.	.	.	.	1030	.	.	.
Predicted Secondary structure																																																										.	.	.	.
Query SS confidence																																																										.	.	.	.
Query Sequence		F	A	S	T	I	S	D	I	E	T	A	A	D	K	C	E	E	M	E	E	G	Y	I	Q	C	S	Q	F	L	Y	G	V	Q	E	K	L	G	V	M	N	K	G	T	V	Y	A	L	W	D	Y	E	A	Q	N	S	D	.	.	.	.
Query Conservation																																																										.	.	.	.
Alig confidence																												.	.	.	.	.	.	.																								.	.	.	.
Template Conservation																												.	.	.	.	.	.	.
Template Sequence		Y	S	R	F	E	A	K	I	H	D	L	R	E	Q	L	M	N	S	S	L	G	S	G	T	A	S	.	.	.	.	.	.	.	L	R	S	N	P	K	R	G	F	Y	I	R	A	L	F	D	Y	D	K	T	K	D	C	G	F	L	S
Template Known Secondary structure				T	B	T	T	T	B							S					S			T	T	T	T	.	.	.	.	.	.	.					S	S	S	S	S					S	S		B						S				S
Template Predicted Secondary structure																												.	.	.	.	.	.	.
Template SS confidence
		394	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.								420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.
			1034	.	.	.	.	.	1040	.	.	.	.	.	.	.	.	.	1050	.	.	.	.	.	.	.	.	.	1060	.	.	.	.							.	.	.	.	.	1070	.	.	.
Predicted Secondary structure		.																																.	.	.	.	.	.
Query SS confidence		.																																.	.	.	.	.	.
Query Sequence		.	E	L	S	F	H	E	G	D	A	I	T	I	L	R	R	K	D	E	N	E	T	E	W	W	W	A	R	L	G	D	R	.	.	.	.	.	.	E	G	Y	V	P	K	N	L	L
Query Conservation		.																																.	.	.	.	.	.
Alig confidence		.																				.	.	.										.	.	.	.	.	.
Template Conservation																						.	.	.
Template Sequence		Q	A	L	S	F	R	F	G	D	V	L	H	V	I	D	A	G	D	E	E	.	.	.	W	W	Q	A	R	R	V	H	S	D	S	E	T	D	D	I	G	F	I	P	S	K	R	R
Template Known Secondary structure		S	B			B		T	T										S	S	S	.	.	.									S	S		T	T	S
Template Predicted Secondary structure																						.	.	.
Template SS confidence
		447	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.				.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions	Phyre2 is part of Genome3D