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Job DescriptionQ62415
Confidence99.48%DateTue Jul 30 13:16:45 BST 2013
Rank68Aligned Residues60
% Identity27%Templatec2rqvA_
PDB info PDB header:signaling proteinChain: A: PDB Molecule:bud emergence protein 1; PDBTitle: solution structure of sh3ci domain of bem1p
ResolutionUNK

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   1014.....1020.........1030.........1040.........1050.........1060..... ....1070
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Query Sequence  GVMNKGTVYALWDYEAQNSDELSFHEGDAITILRRKDENETEWWWARLGDRE. . . GYVPK
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Template Sequence  GPLGSLYAIVLYDFKAEKADELTTYVGENLFICAHHNC. . . EWFIAKPIGRLGGPGLVPV
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S


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SSSB



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TT...T

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   153......160.........170.........180.........190 .........200.........
 
   1071.....
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Query Sequence  NLLGLY
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Template Sequence  GFVSII
Template Known Secondary structure  TT
B

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   210.....
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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