Job Description Q62415 Confidence 24.59% Date Tue Jul 30 13:16:45 BST 2013 Rank 488 Aligned Residues 69 % Identity 22% Template c2lw1A_ PDB info PDB header:dna binding protein Chain: A: PDB Molecule:abc transporter atp-binding protein uup; PDBTitle: the c-terminal domain of the uup protein is a dna-binding coiled coil2 motif Resolution UNK

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		137	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	Q	Q	Q	Q	I	E	N	Q	Q	Q	M	L	V	A	K	E	Q	R	L	H	F	L	K	Q	Q	E	R	R	Q	Q	Q	S	V	S	E	N	E	K	L	Q	K	L	K	E	R	V	E	A	Q	E	N	K	L	K	K	I	R	A	M
Query Conservation
Alig confidence
Template Conservation
Template Sequence		K	L	Q	R	E	L	E	Q	L	P	Q	L	L	E	D	L	E	A	K	L	E	A	L	Q	T	Q	V	A	D	A	S	F	F	S	Q	P	H	E	Q	T	Q	K	V	L	A	D	M	A	A	A	E	Q	E	L	E	Q	A	F	E	R
Template Known Secondary structure																														S	T	T	G	G	G	S
Template Predicted Secondary structure
Template SS confidence
		565	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.
		197	.	.	200	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	G	Q	V	D	Y	S	K	I
Query Conservation
Alig confidence
Template Conservation
Template Sequence		W	E	Y	L	E	A	L	K	N
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		625	.	.	.	.	630	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions	Phyre2 is part of Genome3D