Job Description Q62415 Confidence 34.33% Date Tue Jul 30 13:16:45 BST 2013 Rank 436 Aligned Residues 87 % Identity 13% Template c2eqbC_ PDB info PDB header:endocytosis/exocytosis Chain: C: PDB Molecule:rab guanine nucleotide exchange factor sec2; PDBTitle: crystal structure of the rab gtpase sec4p, the sec2p gef2 domain, and phosphate complex Resolution 2.70 Å

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		193	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	R	A	M	R	G	Q	V	D	Y	S	K	I	M	N	G	N	L	S	A	E	I	E	R	F	S	A	M	F	Q	E	K	K	Q	E	V	Q	T	A	I	L	R	V	D	Q	L	S	Q	Q	L	E	D	L	K	K	G	K	L	N	G
Query Conservation
Alig confidence
Template Conservation
Template Sequence		Y	N	Q	L	K	E	D	Y	N	T	L	K	R	E	L	S	D	R	D	D	E	V	K	R	L	R	E	D	I	A	K	E	N	E	L	R	T	K	A	E	E	E	A	D	K	L	N	K	E	V	E	D	L	T	A	S	L	F	D	E
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		52	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.
		253	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
Predicted Secondary structure
Query SS confidence
Query Sequence		F	Q	S	Y	N	G	R	L	T	G	P	A	A	V	E	L	K	R	L	Y	Q	E	L	Q	I	R	N	Q
Query Conservation
Alig confidence												.
Template Conservation												.
Template Sequence		A	N	N	M	V	A	D	A	R	K	.	E	K	Y	A	I	E	I	L	N	K	R	L	T	E	Q	L	R
Template Known Secondary structure												.																T	T
Template Predicted Secondary structure												.
Template SS confidence
		112	.	.	.	.	.	.	.	120	.		.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions	Phyre2 is part of Genome3D