Job Description Q62415 Confidence 80.49% Date Tue Jul 30 13:16:45 BST 2013 Rank 356 Aligned Residues 104 % Identity 18% Template c2e7sM_ PDB info PDB header:endocytosis/exocytosis Chain: M: PDB Molecule:rab guanine nucleotide exchange factor sec2; PDBTitle: crystal structure of the yeast sec2p gef domain Resolution 3.00 Å

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		174	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	K	L	Q	K	L	K	E	R	V	E	A	Q	E	N	K	L	K	K	I	R	A	M	R	G	Q	V	D	Y	S	K	I	M	N	G	N	L	S	A	E	I	E	R	F	S	A	M	F	Q	E	K	K	Q	E	V	Q	T	A	I	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		E	Q	L	N	K	S	L	K	T	I	A	S	Q	K	A	A	I	E	N	Y	N	Q	L	K	E	D	Y	N	T	L	K	R	E	L	S	D	R	D	D	E	V	K	R	L	R	E	D	I	A	K	E	N	E	L	R	T	K	A	E	E
Template Known Secondary structure																																				T	T																						T	T	T
Template Predicted Secondary structure
Template SS confidence
		33	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.
		234	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	V	D	Q	L	S	Q	Q	L	E	D	L	K	K	G	K	L	N	G	F	Q	S	Y	N	G	R	L	T	G	P	A	A	V	E	L	K	R	L	Y	Q	E	L	Q	I	R	N	Q	L	N	Q	E	Q	N	S	K	L	Q	Q	Q
Query Conservation
Alig confidence																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		E	A	D	K	L	N	K	E	V	E	D	L	T	A	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	F	D	E	A	N	N	L	V	A	D	A	R	X	E	K	Y	A	I	E	I	L	N	K	R	L	T	E	Q
Template Known Secondary structure		T					T	T	T								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																			T	T	G	G	G						T
Template Predicted Secondary structure																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		93	.	.	.	.	.	.	100	.	.	.	.	.	.	.																.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions	Phyre2 is part of Genome3D