Job Description Q62415 Confidence 79.41% Date Tue Jul 30 13:16:45 BST 2013 Rank 357 Aligned Residues 296 % Identity 10% Template c2ch7A_ PDB info PDB header:chemotaxis Chain: A: PDB Molecule:methyl-accepting chemotaxis protein; PDBTitle: crystal structure of the cytoplasmic domain of a bacterial2 chemoreceptor from thermotoga maritima Resolution 2.5 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		15	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	I	L	T	E	V	P	I	T	P	E	T	T	C	R	D	V	V	E	F	C	K	E	P	G	E	G	G	C	H	L	A	E	V	W	R	G	S	E	R	P	I	P	Y	D	H	M	M	Y	E	H	L	Q	K	W	G	P	R	R	E
Query Conservation
Alig confidence
Template Conservation
Template Sequence		S	H	M	K	D	V	Q	T	E	T	F	S	V	A	E	S	I	E	E	I	S	K	A	N	E	E	I	T	N	Q	L	L	G	I	S	K	E	M	D	N	I	S	T	R	I	E	S	I	S	A	S	V	Q	E	T	T	A	G	S	E
Template Known Secondary structure		T	T	T
Template Predicted Secondary structure
Template SS confidence
		222	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.
		75	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	V	K	F	F	L	R	H	E	D	S	P	T	E	S	S	E	Q	G	A	R	Q	T	Q	E	Q	R	T	Q	R	S	V	V	N	V	P	G	E	K	R	T	E	N	G	V	G	N	P	R	V	E	L	T	L	S	E	L	Q	D	M
Query Conservation
Alig confidence											.	.	.	.	.	.
Template Conservation											.	.	.	.	.	.
Template Sequence		E	I	S	S	A	T	K	N	I	.	.	.	.	.	.	A	D	S	A	Q	Q	A	A	S	F	A	D	Q	S	T	Q	L	A	K	E	A	G	D	A	L	K	K	V	I	E	V	T	R	M	I	S	N	S	A	K	D	V	E	R	V
Template Known Secondary structure											.	.	.	.	.	.
Template Predicted Secondary structure											.	.	.	.	.	.
Template SS confidence
		282	.	.	.	.	.	.	.	290							.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.
		135	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.													.	.	.	.	.	.	.	180	.	.
Predicted Secondary structure																																								.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																								.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		A	A	R	Q	Q	Q	Q	I	E	N	Q	Q	Q	M	L	V	A	K	E	Q	R	L	H	F	L	K	Q	Q	E	R	R	Q	Q	Q	S	V	S	E	.	.	.	.	.	.	.	.	.	.	.	.	N	E	K	L	Q	K	L	K	E	R
Query Conservation																																								.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																								.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		V	E	S	F	Q	K	G	A	E	E	I	T	S	F	V	E	T	I	N	A	I	A	E	Q	T	N	L	L	A	L	N	A	A	I	E	A	A	R	A	G	E	A	G	R	G	F	A	V	V	A	D	E	I	R	K	L	A	E	E	S
Template Known Secondary structure								T	T																														T	T		T	T
Template Predicted Secondary structure
Template SS confidence
		336	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.
		183	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	E	A	Q	E	N	K	L	K	K	I	R	A	M	R	G	Q	V	D	Y	S	K	I	M	N	G	N	L	S	A	E	I	E	R	F	S	A	M	F	Q	E	K	K	Q	E	V	Q	T	A	I	L	R	V	D	Q	L	S	Q	Q	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		Q	Q	A	S	E	N	V	R	R	V	V	N	E	I	R	S	I	A	E	D	A	G	K	V	S	S	E	I	T	A	R	V	E	E	G	T	K	L	A	D	E	A	D	E	K	L	N	S	I	V	G	A	V	E	R	I	N	E	M	L
Template Known Secondary structure																					T	T																	T	T
Template Predicted Secondary structure
Template SS confidence
		396	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.
		243	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	D	L	K	K	G	K	L	N	G	F	Q	S	Y	N	G	R	L	T	G	P	A	A	V	E	L	K	R	L	Y	Q	E	L	Q	I	R	N	Q	L	N	Q	E	Q	N	S	K	L	Q	Q	Q	K	E	L	L	N	K	R	N	M	E
Query Conservation
Alig confidence																		.	.	.	.	.
Template Conservation																		.	.	.	.	.
Template Sequence		Q	N	I	A	A	A	I	E	E	Q	T	A	A	V	D	E	.	.	.	.	.	I	T	T	A	M	T	E	N	A	K	N	A	E	E	I	T	N	S	V	K	E	V	N	A	R	L	Q	E	I	S	A	S	T	E	E	V	T	S	R
Template Known Secondary structure																		.	.	.	.	.
Template Predicted Secondary structure																		.	.	.	.	.
Template SS confidence
		456	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.						.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510
		303	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	A	M	M	D	K	R	I	S	E	L	R	E	R	L	Y	G	K	K
Query Conservation
Alig confidence
Template Conservation
Template Sequence		V	Q	T	I	R	E	N	V	Q	M	L	K	E	I	V	A	R	Y	K
Template Known Secondary structure										S	T	T	T
Template Predicted Secondary structure
Template SS confidence
		511	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions	Phyre2 is part of Genome3D