Return to main results Retrieve Phyre Job Id

Job DescriptionQ62415
Confidence99.46%DateTue Jul 30 13:16:45 BST 2013
Rank89Aligned Residues63
% Identity24%Templatec1z9qA_
PDB info PDB header:oxidoreductase activatorChain: A: PDB Molecule:neutrophil cytosol factor 4; PDBTitle: solution structure of sh3 domain of p40phox
ResolutionUNK

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   1016...1020.........1030.........1040.........1050.........1060.........1070.....
Predicted Secondary structure 

































Query SS confidence 



























































Query Sequence  MNKGTVYALWDYEAQNSDELSFHEGDAITILRRKDENETEWWWARLGDREGYVPKNLLGL
Query Conservation         
   
 
   


 
  

 
      
     

        
  
 
    
Alig confidence 




































...



















Template Conservation         

 

      


   

 
 
       ...
  
   
  
 

  

  
Template Sequence  MAAPRAEALFDFTGNSKLELNFKAGDVIFLLSRINKD. . . WLEGTVRGATGIFPLSFVKI
Template Known Secondary structure  SS


SS



SSTTB



TT

B


SSSS...TTGGG
Template Predicted Secondary structure 




















...



Template SS confidence 



























































   3......10.........20.........30......... 40.........50.........
 
   1076...1080.
Predicted Secondary structure 





Query SS confidence 





Query Sequence  YPRIKP
Query Conservation        
Alig confidence 





Template Conservation 
   
 
Template Sequence  LKDFPE
Template Known Secondary structure  SS



Template Predicted Secondary structure 





Template SS confidence 





   60.....
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions
Phyre2 is part of Genome3D