 |
| Job Description | Q62415 | | Confidence | 99.46% | Date | Tue Jul 30 13:16:45 BST 2013 |
| Rank | 89 | Aligned Residues | 63 |
| % Identity | 24% | Template | c1z9qA_ |
| PDB info |
PDB header:oxidoreductase activator | Chain: A: PDB Molecule:neutrophil cytosol factor 4; |
PDBTitle: solution structure of sh3 domain of p40phox
|
| Resolution | UNK |
|
 |
|   |   |
1016 | . | . | . | 1020 | . | . | . | . | . | . | . | . | . | 1030 | . | . | . | . | . | . | . | . | . | 1040 | . | . | . | . | . | . | . | . | . | 1050 | . | . | . | . | . | . | . | . | . | 1060 | . | . | . | . | . | . | . | . | . | 1070 | . | . | . | . | . |
| Predicted Secondary structure |   |
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|  |  |  |  |  |
|
|  |  |  |  |  |
|
|  |  |  |  |
|
| Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Query Sequence |   |
M | N | K | G | T | V | Y | A | L | W | D | Y | E | A | Q | N | S | D | E | L | S | F | H | E | G | D | A | I | T | I | L | R | R | K | D | E | N | E | T | E | W | W | W | A | R | L | G | D | R | E | G | Y | V | P | K | N | L | L | G | L |
| Query Conservation |   |
  |   |   |   |   |   |   |
|   |   |   |
|   |
|   |   |   |
|
|
|   |
|   |   |
|
|   |
|   |   |   |   |   |   |
|   |   |   |   |   |
|
|   |   |   |   |   |   |   |   |
|   |   |
|   |
|   |   |   |   |
| Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Template Conservation |   |
  |   |   |   |   |   |   |
|
|   |
|
|   |   |   |   |   |   |
|
|
|   |   |   |
|
|   |
|   |
|   |   |   |   |   |   |   | . | . | . |
|   |   |
|   |   |   |
|   |   |
|   |
|
|   |   |
|
|   |   |
| Template Sequence |   |
M | A | A | P | R | A | E | A | L | F | D | F | T | G | N | S | K | L | E | L | N | F | K | A | G | D | V | I | F | L | L | S | R | I | N | K | D | . |
. |
. |
W | L | E | G | T | V | R | G | A | T | G | I | F | P | L | S | F | V | K | I |
| Template Known Secondary structure |   |
S | S |
|
|
|  |  |  | S | S |
|
|
|
| S | S | T | T | B |
|
|
|
| T | T |
|
| B |
|
|
|  |  | S | S | S | S | . | . | . |  |  |  |  |  |  | T | T |  |  |  |  |  |  | G | G | G |  |  |  |
| Template Predicted Secondary structure |   |
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|
|
|
|  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |
|
|
|
| . | . | . |  |  |  |  |  |  |
|
|  |  |  |  |  |  |
|
|  |  |  |  |
| Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|   |   |
3 | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | |
|
|
40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . |
|   |
|   |   |
1076 | . | . | . | 1080 | . |
| Predicted Secondary structure |   |
|
|
|
|
|
|
| Query SS confidence |   |
|
|
|
|
|
|
| Query Sequence |   |
Y | P | R | I | K | P |
| Query Conservation |   |
  |   |   |   |   |   |
| Alig confidence |   |
|
|
|
|
|
|
| Template Conservation |   |
|   |   |   |
|   |
| Template Sequence |   |
L | K | D | F | P | E |
| Template Known Secondary structure |   |
S | S |
|
|
|
|
| Template Predicted Secondary structure |   |
|
|
|
|
|
|
| Template SS confidence |   |
|
|
|
|
|
|
|   |   |
60 | . | . | . | . | . |
|   |
No model constructed - rank, confidence too low
Phyre is for academic use only
| Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
| Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
|   |
|
|
Phyre2 is part of Genome3D |
|