Return to main results Retrieve Phyre Job Id

Job DescriptionQ62415
Confidence99.46%DateTue Jul 30 13:16:45 BST 2013
Rank88Aligned Residues71
% Identity31%Templatec1x69A_
PDB info PDB header:signaling proteinChain: A: PDB Molecule:cortactin isoform a; PDBTitle: solution structures of the sh3 domain of human src2 substrate cortactin
ResolutionUNK

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   1007..1010.........1020.........1030.........1040.........1050.........1060......
Predicted Secondary structure 







































Query SS confidence 



























































Query Sequence  YGVQEKLGVMNKGTVYALWDYEAQNSDELSFHEGDAITILRRKDENETEWWWARLGDREG
Query Conservation                  
   
 
   


 
  

 
      
     

        
Alig confidence 












































...











Template Conservation                  

 

      


   

 
 

     ... 

        
Template Sequence  SGTYDEYENDLGITAVALYDYQAAGDDEISFDPDDIITNIEMIDD. . . GWWRGVCKGRYG
Template Known Secondary structure 

S










SS



SSSSB



TT

SS...STT
Template Predicted Secondary structure 




























...


Template SS confidence 



























































   6...10.........20.........30.........40.........50 .........60..
 
   1067..1070.........1080
Predicted Secondary structure 







Query SS confidence 













Query Sequence  YVPKNLLGLYPRIK
Query Conservation    
 
         
Alig confidence 













Template Conservation   

  

  
   
Template Sequence  LFPANYVELRQSGP
Template Known Secondary structure  TTS




Template Predicted Secondary structure 





Template SS confidence 













   63......70......
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions
Phyre2 is part of Genome3D