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Job DescriptionQ62415
Confidence99.36%DateTue Jul 30 13:16:45 BST 2013
Rank178Aligned Residues56
% Identity38%Templatec1w1fA_
PDB info PDB header:sh3-domainChain: A: PDB Molecule:tyrosine-protein kinase lyn; PDBTitle: sh3 domain of human lyn tyrosine kinase
ResolutionUNK

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   1017..1020.........1030.........1040.........1050.........1060 .........1070....
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Query Sequence  NKGTVYALWDYEAQNSDELSFHEGDAITILRRKDENETEWWWAR. . LGDREGYVPKNLLG
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Template Sequence  QGDIVVALYPYDGIHPDDLSFKKGEKMKVLEEHGE. . . . WWKAKSLLTKKEGFIPSNYVA
Template Known Secondary structure 

SS
B


SSS


B
TT

SS....TTT

TTT
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   910.........20.........30.........40... ......50.........60....
 
   1075.
Predicted Secondary structure 

Query SS confidence 

Query Sequence  LY
Query Conservation    
Alig confidence 

Template Conservation   
Template Sequence  KL
Template Known Secondary structure  S
Template Predicted Secondary structure 
Template SS confidence 

   65.
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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