Return to main results Retrieve Phyre Job Id

Job DescriptionQ62415
Confidence99.62%DateTue Jul 30 13:16:45 BST 2013
Rank12Aligned Residues120
% Identity23%Templatec1ov3A_
PDB info PDB header:oxidoreductase activatorChain: A: PDB Molecule:neutrophil cytosol factor 1; PDBTitle: structure of the p22phox-p47phox complex
Resolution1.80 Å
Model Dimensions (Å)X:61.759 Y:64.536 Z:35.670

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   944.....950.........960.........970.........980.........990.........1000...
Predicted Secondary structure 










































Query SS confidence 



























































Query Sequence  VNAADSDGWTPLHCAASCNSVHLCKQLVESGAAIFASTISDIETAADKCEEMEEGYIQCS
Query Conservation      
  
 



 

          
   
                             
Alig confidence 


























































.
Template Conservation   




 
    


   

 
 
       

 
      
  
              .
Template Sequence  RAIADYEKTSGSEMALSTGDVVEVVEKSESGWWFCQMKAKRGWIPASFLEPLDSPDETE.
Template Known Secondary structure 

S
B

SSTTS

B
TT

TTS








GGG


SS
TTS

.
Template Predicted Secondary structure 































.
Template SS confidence 



























































   162.......170.........180.........190.........200.........210.........220
 
   1004.....1010.........1020.........1030.........1040.........1050.........1060...
Predicted Secondary structure 










































Query SS confidence 



























































Query Sequence  QFLYGVQEKLGVMNKGTVYALWDYEAQNSDELSFHEGDAITILRRKDENETEWWWARLGD
Query Conservation                     
   
 
   


 
  

 
      
     

      
Alig confidence  .......









































...







Template Conservation  .......            
          


   

 
 
      
...
      
Template Sequence  . . . . . . . DPEPNYAGEPYVAIKAYTAVEGDEVSLLEGEAVEVIHKLLDG. . . WWVIRKDD
Template Known Secondary structure  .......S



TT
SS
B


STTB

B
TT


TTS...TT
Template Predicted Secondary structure  .......
























...

Template SS confidence 



























































   221........230.........240.........250.........260.. .......270
 
   1064.....1070....
Predicted Secondary structure 

Query SS confidence 










Query Sequence  REGYVPKNLLG
Query Conservation    
  
 
   
Alig confidence 










Template Conservation    
 

  


Template Sequence  VTGYFPSMYLQ
Template Known Secondary structure  GGG
Template Predicted Secondary structure 

Template SS confidence 










   271........280.
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions
Phyre2 is part of Genome3D