Phyre 2 alignment of A2A5N8 with c3kkaD

Job Description A2A5N8
Confidence 97.65% Date Wed Jul 10 14:39:59 BST 2013

Rank 59 Aligned Residues 59

% Identity 15% Template c3kkaD_

PDB info PDB header:transferase Chain: D: PDB Molecule:ephrin type-a receptor 2; PDBTitle: co-crystal structure of the sam domains of epha1 and epha2

Resolution 2.40 Å

	Insertion relative to template
	Deletion relative to template
	Catalytic residue from the CSA

Detailed help on interpreting your alignment

	761	.	.	.	.	.	.	.	.	770	.	.	.	.	.	.	.	.	.	780	.	.	.	.	.	.	.	.	.	790	.	.	.	.	.	.	.	.	.	800	.	.	.		.	.	.	.	.	.	810	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																												.
Query SS confidence																																												.
Query Sequence	E	V	F	G	F	V	Q	T	L	T	G	S	E	D	Q	A	R	L	F	K	D	E	M	I	D	G	E	A	F	L	L	L	T	Q	A	D	I	V	K	I	M	S	V	.	K	L	G	P	A	L	K	I	Y	N	A	I	L	M	F	K
Query Conservation																																												.
Alig confidence										.																																		.
Template Conservation										.
Template Sequence	T	V	S	E	W	L	E	S	I	.	K	M	Q	Q	Y	T	E	H	F	M	A	A	G	Y	T	A	I	E	K	V	V	Q	M	T	N	D	D	I	K	R	I	G	V	R	L	P	G	H	Q	K	R	I	A	Y	S	L	L	G	L	K
Template Known Secondary structure	S							T	T	.	T		G	G	G							T	T			S					T	T									T	T
Template Predicted Secondary structure										.
Template SS confidence
	908	.	910	.	.	.	.	.	.		.	.	.	920	.	.	.	.	.	.	.	.	.	930	.	.	.	.	.	.	.	.	.	940	.	.	.	.	.	.	.	.	.	950	.	.	.	.	.	.	.	.	.	960	.	.	.	.	.	.

	820
Predicted Secondary structure
Query SS confidence
Query Sequence	N
Query Conservation
Alig confidence
Template Conservation
Template Sequence	D
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
	967

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No model constructed - rank, confidence too low

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server

Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]

© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys
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Phyre2 is part of Genome3D