Job Description A2A5N8 Confidence 98.90% Date Wed Jul 10 14:39:59 BST 2013 Rank 34 Aligned Residues 62 % Identity 34% Template c3k1rB_ PDB info PDB header:structural protein Chain: B: PDB Molecule:usher syndrome type-1g protein; PDBTitle: structure of harmonin npdz1 in complex with the sam-pbm of2 sans Resolution 2.30 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		761	.	.	.	.	.	.	.	.	770	.	.	.	.	.	.	.	.	.	780	.	.	.	.	.	.	.	.	.	790	.	.	.	.	.	.	.	.	.	800	.	.	.	.	.	.	.	.	.	810	.	.	.	.	.	.	.	.	.	820
Predicted Secondary structure
Query SS confidence
Query Sequence		E	V	F	G	F	V	Q	T	L	T	G	S	E	D	Q	A	R	L	F	K	D	E	M	I	D	G	E	A	F	L	L	L	T	Q	A	D	I	V	K	I	M	S	V	K	L	G	P	A	L	K	I	Y	N	A	I	L	M	F	K	N
Query Conservation
Alig confidence											.																														.
Template Conservation											.																														.
Template Sequence		P	L	E	T	F	L	A	S	L	.	H	M	E	D	F	A	A	L	L	R	Q	E	K	I	D	L	E	A	L	M	L	C	S	D	L	D	L	R	S	.	I	S	V	P	L	G	P	R	E	K	I	L	G	A	V	R	R	R	R	Q
Template Known Secondary structure									T	T	.	T		G	G	G							T	T							T	T									.	T	T
Template Predicted Secondary structure											.																														.
Template SS confidence
		391	.	.	.	.	.	.	.	.		400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.		.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.
		821	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	D	D	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	M	E	R
Template Known Secondary structure					S
Template Predicted Secondary structure
Template SS confidence
		449	450	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions	Phyre2 is part of Genome3D