Job Description A2A5N8 Confidence 100.00% Date Wed Jul 10 14:39:59 BST 2013 Rank 3 Aligned Residues 312 % Identity 36% Template c3h6zA_ PDB info PDB header:transcription Chain: A: PDB Molecule:polycomb protein sfmbt; PDBTitle: crystal structure of the four mbt repeats of drosophila melanogaster2 sfmbt in complex with peptide rhr (me)k vlr Resolution 2.80 Å Model Dimensions (Å) X:61.317 Y:83.517 Z:40.690

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		275	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	K	K	D	G	W	S	W	E	S	Y	L	E	E	Q	K	A	V	T	A	P	V	S	L	F	Q	D	S	Q	A	V	T	H	N	K	N	G	F	K	L	G	M	K	L	E	G	I	D	P	Q	H	P	S	M	Y	F	I	L	T	V
Query Conservation
Alig confidence																																			.																.	.	.	.	.
Template Conservation																																			.																.	.	.	.	.
Template Sequence		G	A	M	G	S	Y	D	W	L	P	R	L	S	K	E	N	F	N	A	A	P	V	T	C	F	P	H	A	P	G	C	E	V	.	W	D	N	L	G	V	G	M	K	V	E	V	E	T	S	.	.	.	.	.	F	W	V	A	T	I
Template Known Secondary structure				S					S					T	S	T	T			B			G	G	G		T	T	S	T	T				.		T	T			T	T									.	.	.	.	.	B
Template Predicted Secondary structure																																			.																.	.	.	.	.
Template SS confidence
		531	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.		.	.	.	.	.	.	570	.	.	.	.	.	.	.	.						.	580	.	.	.	.
		335	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350		.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.
Predicted Secondary structure																		.
Query SS confidence																		.
Query Sequence		A	E	V	C	G	Y	R	L	R	L	H	F	D	G	Y	S	.	E	C	H	D	F	W	V	N	A	N	S	P	D	I	H	P	A	G	W	F	E	K	T	G	H	K	L	Q	L	P	K	G	Y	K	E	E	E	F	S	W	S	Q	Y
Query Conservation																		.
Alig confidence																		.
Template Conservation
Template Sequence		L	E	I	K	G	Y	K	A	L	M	S	Y	E	G	F	D	T	D	S	H	D	F	W	V	N	L	C	N	A	E	V	H	S	V	G	W	C	A	T	R	G	K	P	L	I	P	P	R	T	I	E	H	K	Y	K	D	W	K	D	F
Template Known Secondary structure						T	T							T	T		S	S	G	G	G						T	T	T	S	S		B		T	T						T			B				G	G	G	G	G	G		S
Template Predicted Secondary structure
Template SS confidence
		601	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660
		394			.	.	.	.	.	400	.	.	.	.	.	.	.
Predicted Secondary structure			.	.														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence			.	.														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		L	.	.	R	S	T	K	A	Q	A	A	P	K	H	L	F	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation			.	.														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence			.	.														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		L	V	G	R	L	S	G	A	R	T	L	P	S	N	F	Y	N	K	I	N	D	S	L	Q	S	R	F	R	L	G	L	N	L	E	C	V	D	K	D	R	I	S	Q	V	R	L	A	T	V	T	K	I	V	G	D	R	L	F	L	R
Template Known Secondary structure							T	T				S		T	T									T	S		S	S		T	T								T	T		T	T												T	T
Template Predicted Secondary structure
Template SS confidence
		661	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		Y	F	D	S	D	D	G	F	W	C	H	E	D	S	P	I	I	H	P	V	G	W	A	T	T	V	G	H	N	L	A	A	P	Q	D	Y	L	E	R	M	L	A	G	R	E	A	M	I	E	V	H	E	D	D	A	T	I	E	L	F
Template Known Secondary structure			T	T		S							T	T		T	T				T	T						T															T	T	T	T	T						T	T	B			G	G	G	S
Template Predicted Secondary structure
Template SS confidence
		721	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.	.	.	.	.	.	.	.	.	750	.	.	.	.	.	.	.	.	.	760	.	.	.	.	.	.	.	.	.	770	.	.	.	.	.	.	.	.	.	780
								408	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.		.	450	.	.	.	.	.	.	.	.	.	460
Predicted Secondary structure		.	.	.	.	.	.																																										.
Query SS confidence		.	.	.	.	.	.																																										.
Query Sequence		.	.	.	.	.	.	V	S	Q	S	H	S	T	P	P	V	G	F	Q	V	G	M	K	L	E	A	V	D	R	M	N	P	S	L	V	C	V	A	S	V	T	D	V	V	D	S	R	.	F	L	V	H	F	D	D	W	G	D	T	Y
Query Conservation		.	.	.	.	.	.																																										.
Alig confidence		.	.	.	.	.	.																																										.
Template Conservation
Template Sequence		K	M	N	F	T	F	D	E	Y	Y	S	D	G	K	T	N	S	F	V	E	G	M	K	L	E	A	V	D	P	L	N	L	S	S	I	C	P	A	T	V	M	A	V	L	K	F	G	Y	M	M	I	R	I	D	S	Y	Q	P	D	A
Template Known Secondary structure				S	S		T					T	S								T	T								T	T															S	T	T							T	T	S		T	T
Template Predicted Secondary structure
Template SS confidence
		781	.	.	.	.	.	.	.	.	790	.	.	.	.	.	.	.	.	.	800	.	.	.	.	.	.	.	.	.	810	.	.	.	.	.	.	.	.	.	820	.	.	.	.	.	.	.	.	.	830	.	.	.	.	.	.	.	.	.	840
		461					.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.
Predicted Secondary structure			.	.	.	.
Query SS confidence			.	.	.	.
Query Sequence		D	.	.	.	.	Y	W	C	D	P	S	S	P	Y	I	H	P	V	G	W	C	Q	K	Q	G	K	P	L	T	P	P	Q	D	Y	P	D	P	D	S	F	C	W	E	K	Y	L	E	E	T	G	T	S	A	V	P	N	W	A	F	K
Query Conservation			.	.	.	.
Alig confidence			.	.	.	.																																.
Template Conservation																																						.
Template Sequence		S	G	S	D	W	F	C	Y	H	E	K	S	P	C	I	F	P	A	G	F	C	S	V	N	N	I	S	V	T	P	P	N	G	Y	D	S	.	R	T	F	T	W	E	G	Y	L	S	D	T	G	A	V	A	A	G	Q	H	L	F	H
Template Known Secondary structure		T	T	T	T						T	T		T	T				T	T					T	T							T	T			T	.	T	T											T			B			G	G	G	S
Template Predicted Secondary structure																																						.
Template SS confidence
		841	.	.	.	.	.	.	.	.	850	.	.	.	.	.	.	.	.	.	860	.	.	.	.	.	.	.	.	.	870	.	.	.	.	.	.		.	.	.	880	.	.	.	.	.	.	.	.	.	890	.	.	.	.	.	.	.	.	.
		517	.	.	520		.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.
Predicted Secondary structure						.
Query SS confidence						.
Query Sequence		V	R	P	P	.	H	S	F	L	V	N	M	K	L	E	A	V	D	R	R	N	P	A	L	I	R	V	A	S	V	E	D	V	E	D	H	R	I	K	L	H	F	D	G	W	S	H	N	Y	D	F	W	I	D	A	D	H	P	D	I
Query Conservation						.
Alig confidence						.
Template Conservation
Template Sequence		D	I	I	P	D	H	G	F	E	V	G	M	S	L	E	C	A	D	L	M	D	P	R	L	V	C	V	A	T	V	A	R	V	V	G	R	L	L	K	V	H	F	D	G	W	T	D	E	Y	D	Q	W	L	D	C	E	S	A	D	I
Template Known Secondary structure											T	T								T	T	S	T	T												T	T							T	T	S		G	G	G						T	T		T	T
Template Predicted Secondary structure
Template SS confidence
		900	.	.	.	.	.	.	.	.	.	910	.	.	.	.	.	.	.	.	.	920	.	.	.	.	.	.	.	.	.	930	.	.	.	.	.	.	.	.	.	940	.	.	.	.	.	.	.	.	.	950	.	.	.	.	.	.	.	.	.
		576	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		H	P	A	G	W	C	S	K	T	G	H	P	L	E	P	P	L	R
Query Conservation
Alig confidence
Template Conservation
Template Sequence		Y	P	V	G	W	C	V	L	V	N	H	K	L	E	G	P	P	R
Template Known Secondary structure				T	T						T
Template Predicted Secondary structure
Template SS confidence
		960	.	.	.	.	.	.	.	.	.	970	.	.	.	.	.	.	.