Job Description A2A5N8 Confidence 100.00% Date Wed Jul 10 14:39:59 BST 2013 Rank 5 Aligned Residues 306 % Identity 36% Template c3feoB_ PDB info PDB header:metal binding protein Chain: B: PDB Molecule:mbt domain-containing protein 1; PDBTitle: the crystal structure of mbtd1 Resolution 2.50 Å Model Dimensions (Å) X:56.715 Y:86.570 Z:31.591

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		280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		W	S	W	E	S	Y	L	E	E	Q	K	A	V	T	A	P	V	S	L	F	Q	D	S	Q	A	V	T	H	N	K	N	G	F	K	L	G	M	K	L	E	G	I	D	P	Q	H	P	S	M	Y	F	I	L	T	V	A	E	V	C	G
Query Conservation
Alig confidence																															.														.	.
Template Conservation																															.														.	.
Template Sequence		F	S	W	G	N	Y	I	N	S	N	S	F	I	A	A	P	V	T	C	F	K	H	A	P	M	G	T	C	W	.	G	D	I	S	E	N	V	R	V	E	V	P	N	.	.	T	D	K	V	F	W	I	A	G	I	V	K	L	A	G
Template Known Secondary structure												T			B			G	G	G		T	T	S	T	T	T	T	S		.	T	T			T	T								.	.															T
Template Predicted Secondary structure																															.														.	.
Template SS confidence
		12	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40		.	.	.	.	.	.	.	.	.	50	.	.	.			.	.	.	.	.	.	60	.	.	.	.	.	.	.	.
		340	.	.	.	.	.	.	.	.	.	350	.			.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.			.
Predicted Secondary structure														.	.																																												.	.
Query SS confidence														.	.																																												.	.
Query Sequence		Y	R	L	R	L	H	F	D	G	Y	S	E	.	.	C	H	D	F	W	V	N	A	N	S	P	D	I	H	P	A	G	W	F	E	K	T	G	H	K	L	Q	L	P	K	G	Y	K	E	E	E	F	S	W	S	Q	Y	L	.	.	R
Query Conservation														.	.																																												.	.
Alig confidence														.	.											.									.																								.	.
Template Conservation																										.									.
Template Sequence		Y	N	A	L	L	R	Y	E	G	F	E	N	D	S	G	L	D	F	W	C	N	I	C	G	.	D	I	H	P	V	G	W	C	.	A	A	G	K	P	L	V	P	P	R	T	I	Q	H	K	Y	T	N	W	K	A	F	L	V	K	R
Template Known Secondary structure		T							T	T		T	T			T	T						T	T		.					T	T	T	T	.	T					B				G	G	G	T	T	S		S
Template Predicted Secondary structure																										.									.
Template SS confidence
		74	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.		.	.	100	.	.	.	.	.		.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.
		396	.	.	.	400	.	.	.	.	.	.	.	.	.	410
Predicted Secondary structure																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		S	T	K	A	Q	A	A	P	K	H	L	F	V	S	Q	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		L	T	G	A	K	T	L	P	P	D	F	S	Q	K	V	S	E	S	M	Q	Y	P	F	K	P	C	M	R	V	E	V	V	D	K	R	H	L	C	R	T	R	V	A	V	V	E	S	V	I	G	G	R	L	R	L	V	Y	E	E	S
Template Known Secondary structure			T	T						T	T									T			S			T	T								T	T	S	T	T	B											T	T							S	S
Template Predicted Secondary structure
Template SS confidence
		134	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.
																																						411	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	H	S	T	P	P	V	G	F	Q	V	G	M	K	L	E	A	V	D	R	M	N	P	S
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		E	D	R	T	F	W	C	H	M	H	S	P	L	I	H	H	I	G	W	S	R	S	I	G	H	R	F	H	F	D	T	P	P	H	L	F	A	K	V	K	E	G	E	W	F	K	E	G	M	K	L	E	A	I	D	P	L	N	L	S
Template Known Secondary structure		S	S							T	T		T	T				T	T						T		B							G	G	G	S											T	T								T	T
Template Predicted Secondary structure
Template SS confidence
		194	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.
		435	.	.	.	.	440	.	.	.	.	.	.	.	.		.	450	.	.	.	.	.	.	.	.	.	460	.				.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490
Predicted Secondary structure																.														.	.	.
Query SS confidence																.														.	.	.
Query Sequence		L	V	C	V	A	S	V	T	D	V	V	D	S	R	.	F	L	V	H	F	D	D	W	G	D	T	Y	D	.	.	.	Y	W	C	D	P	S	S	P	Y	I	H	P	V	G	W	C	Q	K	Q	G	K	P	L	T	P	P	Q	D	Y
Query Conservation																.														.	.	.
Alig confidence																.														.	.	.
Template Conservation
Template Sequence		T	I	C	V	A	T	I	R	K	V	L	A	D	G	F	L	M	I	G	I	D	G	S	E	A	A	D	G	S	D	W	F	C	Y	H	A	T	S	P	S	I	F	P	V	G	F	C	E	I	N	M	I	E	L	T	P	P	R	G	Y
Template Known Secondary structure													S	T	T							T	T	S			T	T	S	T	T						T	T		T	T				T	T					T	T							T	T
Template Predicted Secondary structure
Template SS confidence
		271	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330
		491	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.		.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																											.
Query SS confidence																											.
Query Sequence		P	D	P	D	S	F	C	W	E	K	Y	L	E	E	T	G	T	S	A	V	P	N	W	A	F	.	K	V	R	P	P	H	S	F	L	V	N	M	K	L	E	A	V	D	R	R	N	P	A	L	I	R	V	A	S	V	E	D	V	E
Query Conservation																											.
Alig confidence						.																					.
Template Conservation						.
Template Sequence		T	K	L	P	.	F	K	W	F	D	Y	L	R	E	T	G	S	I	A	A	P	V	K	L	F	N	K	D	V	P	N	H	G	F	R	V	G	M	K	L	E	A	V	D	L	M	E	P	R	L	I	C	V	A	T	V	T	R	I	I
Template Known Secondary structure			S	S	S	.										T	T			B			G	G	G	G											T	T								T	T	S	T	T
Template Predicted Secondary structure						.
Template SS confidence
		331	.	.	.		.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.
		550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	H	R	I	K	L	H	F	D	G	W	S	H	N	Y	D	F	W	I	D	A	D	H	P	D	I	H	P	A	G	W	C	S	K	T	G	H	P	L	E	P	P
Query Conservation
Alig confidence
Template Conservation
Template Sequence		H	R	L	L	R	I	H	F	D	G	W	E	E	E	Y	D	Q	W	V	D	C	E	S	P	D	L	Y	P	V	G	W	C	Q	L	T	G	Y	Q	L	Q	P	P
Template Known Secondary structure		T	T							T	T	S		G	G	G						T	T		T	T				T	T						T				B
Template Predicted Secondary structure
Template SS confidence
		390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions	Phyre2 is part of Genome3D