Job Description A2A5N8 Confidence 100.00% Date Wed Jul 10 14:39:59 BST 2013 Rank 4 Aligned Residues 308 % Identity 38% Template c3ceyA_ PDB info PDB header:transcription regulator Chain: A: PDB Molecule:lethal(3)malignant brain tumor-like 2 protein; PDBTitle: crystal structure of l3mbtl2 Resolution 2.20 Å Model Dimensions (Å) X:88.224 Y:50.620 Z:54.753

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		273	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	S	E	K	K	D	G	W	S	W	E	S	Y	L	E	E	Q	K	A	V	T	A	P	V	S	L	F	Q	D	S	Q	A	V	T	H	N	K	N	G	F	K	L	G	M	K	L	E	G	I	D	P	Q	H	P	S	M	Y	F	I	L
Query Conservation
Alig confidence																																						.																		.	.
Template Conservation																																						.																		.	.
Template Sequence		Q	D	A	L	V	L	G	F	D	W	G	K	F	L	K	D	H	S	Y	K	A	A	P	V	S	C	F	K	H	V	P	L	Y	D	Q	W	.	E	D	V	M	K	G	M	K	V	E	V	L	N	S	D	R	V	.	.	Y	W	I	A
Template Known Secondary structure				S															T			B			G	G	G		T	T	S	T	T	G	G	G	T	.	T	S			T	T												.	.
Template Predicted Secondary structure																																						.																		.	.
Template SS confidence
		172	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.		.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.			.	.	.	.
		333	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.			.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390
Predicted Secondary structure																					.	.
Query SS confidence																					.	.
Query Sequence		T	V	A	E	V	C	G	Y	R	L	R	L	H	F	D	G	Y	S	E	.	.	C	H	D	F	W	V	N	A	N	S	P	D	I	H	P	A	G	W	F	E	K	T	G	H	K	L	Q	L	P	K	G	Y	K	E	E	E	F	S	W
Query Conservation																					.	.
Alig confidence																					.	.
Template Conservation
Template Sequence		S	V	I	Q	T	A	G	Y	R	V	L	L	R	Y	E	G	F	E	N	D	A	S	H	D	F	W	C	N	L	G	T	V	D	V	H	P	I	G	W	C	A	I	N	S	K	I	L	V	P	P	R	T	I	H	A	K	F	T	D	W
Template Known Secondary structure								T	T							T	T		T	T			T	T						T	T	S	T	T				T	T					T	T			B				T	T	T	T	T	S		S
Template Predicted Secondary structure
Template SS confidence
		234	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.
		391	.	.	.	.	.			.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.
Predicted Secondary structure								.	.
Query SS confidence								.	.
Query Sequence		S	Q	Y	L	R	S	.	.	T	K	A	Q	A	A	P	K	H	L	F	V	S	Q	S	H	S	T	P	P	V	G	F	Q	V	G	M	K	L	E	A	V	D	R	M	N	P	S	L	V	C	V	A	S	V	T	D	V	V	D	S	R
Query Conservation								.	.
Alig confidence								.	.																.
Template Conservation																									.
Template Sequence		K	G	Y	L	M	K	R	L	V	G	S	R	T	L	P	V	D	F	H	I	K	M	V	.	E	S	M	K	Y	P	F	R	Q	G	M	R	L	E	V	V	D	K	S	Q	V	S	R	T	R	M	A	V	V	D	T	V	I	G	G	R
Template Known Secondary structure										T	T						T	T							.			T	S		S			T	T								T	T															T	T
Template Predicted Secondary structure																									.
Template SS confidence
		294	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.		.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.
		449	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.
Predicted Secondary structure																																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		F	L	V	H	F	D	D	W	G	D	T	Y	D	Y	W	C	D	P	S	S	P	Y	I	H	P	V	G	W	C	Q	K	Q	G	K	P	L	T	P	P	Q	D	Y	P	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence										.	.	.																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation										.	.	.
Template Sequence		L	R	L	L	Y	E	D	D	.	.	.	D	D	F	W	C	H	M	W	S	P	L	I	H	P	V	G	W	S	R	R	V	G	H	G	I	K	M	C	D	A	V	P	Y	L	F	K	K	V	R	A	V	Y	T	E	G	G	W	F	E
Template Known Secondary structure										.	.	.							T	T		T	T				T	T						T							B			G	G	G	S									S	S
Template Predicted Secondary structure										.	.	.
Template SS confidence
		353	.	.	.	.	.	.	360				.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		E	G	M	K	L	E	A	I	D	P	L	N	L	G	N	I	C	V	A	T	V	C	K	V	L	L	D	G	Y	L	M	I	C	V	D	D	W	F	C	Y	H	A	S	S	H	A	I	F	P	A	T	F	C	Q	K	N	D	I	E	L
Template Known Secondary structure		T	T								T	T															G	G	G														T	T		S	S				T	T						T
Template Predicted Secondary structure
Template SS confidence
		430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.
				493	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550
Predicted Secondary structure		.	.
Query SS confidence		.	.
Query Sequence		.	.	P	D	S	F	C	W	E	K	Y	L	E	E	T	G	T	S	A	V	P	N	W	A	F	K	V	R	P	P	H	S	F	L	V	N	M	K	L	E	A	V	D	R	R	N	P	A	L	I	R	V	A	S	V	E	D	V	E	D
Query Conservation		.	.
Alig confidence		.	.																									.	.	.	.
Template Conservation																												.	.	.	.
Template Sequence		T	P	P	K	T	F	N	W	E	N	Y	L	E	K	T	K	S	K	A	A	P	S	R	L	F	N	.	.	.	.	H	G	F	K	V	G	M	K	L	E	A	V	D	L	M	E	P	R	L	I	C	V	A	T	V	K	R	V	V	H
Template Known Secondary structure																T	T			B			G	G	G			.	.	.	.					T	T								T	T	S	T	T												T
Template Predicted Secondary structure																												.	.	.	.
Template SS confidence
		498	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.					.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.
		551	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.
Predicted Secondary structure
Query SS confidence
Query Sequence		H	R	I	K	L	H	F	D	G	W	S	H	N	Y	D	F	W	I	D	A	D	H	P	D	I	H	P	A	G	W	C	S	K	T	G	H	P	L	E	P	P
Query Conservation
Alig confidence
Template Conservation
Template Sequence		R	L	L	S	I	H	F	D	G	W	D	S	E	Y	D	Q	W	V	D	C	E	S	P	D	I	Y	P	V	G	W	C	E	L	T	G	Y	Q	L	Q	P	P
Template Known Secondary structure		T							T	T	S		G	G	G						T	T		T	T				T	T						T
Template Predicted Secondary structure
Template SS confidence
		564	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions	Phyre2 is part of Genome3D