Job Description A2A5N8 Confidence 69.63% Date Wed Jul 10 14:39:59 BST 2013 Rank 100 Aligned Residues 92 % Identity 15% Template c2xdpA_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:lysine-specific demethylase 4c; PDBTitle: crystal structure of the tudor domain of human jmjd2c Resolution 1.56 Å

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		312	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.		.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370
Predicted Secondary structure																													.
Query SS confidence																													.
Query Sequence		F	K	L	G	M	K	L	E	G	I	D	P	Q	H	P	S	M	Y	F	I	L	T	V	A	E	V	C	.	G	Y	R	L	R	L	H	F	D	G	Y	S	E	C	H	D	F	W	V	N	A	N	S	P	D	I	H	P	A	G	W	F
Query Conservation																													.
Alig confidence																	.	.											.										.	.	.	.														.	.	.	.	.	.
Template Conservation																	.	.																					.	.	.	.														.	.	.	.	.	.
Template Sequence		I	S	V	G	Q	T	V	I	T	K	H	R	N	T	R	.	.	Y	Y	S	C	R	V	M	A	V	T	S	Q	T	F	Y	E	V	M	F	D	.	.	.	.	D	G	S	F	S	R	D	T	F	P	E	D	I	.	.	.	.	.	.
Template Known Secondary structure				T	T												.	.																				T	.	.	.	.	T	S								G	G	G	B	.	.	.	.	.	.
Template Predicted Secondary structure																	.	.																					.	.	.	.														.	.	.	.	.	.
Template SS confidence
		879	880	.	.	.	.	.	.	.	.	.	890	.	.	.			.	.	.	.	.	.	900	.	.	.	.	.	.	.	.	.	910	.	.	.					.	.	.	.	.	.	920	.	.	.	.	.	.
		371	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430
Predicted Secondary structure
Query SS confidence
Query Sequence		E	K	T	G	H	K	L	Q	L	P	K	G	Y	K	E	E	E	F	S	W	S	Q	Y	L	R	S	T	K	A	Q	A	A	P	K	H	L	F	V	S	Q	S	H	S	T	P	P	V	G	F	Q	V	G	M	K	L	E	A	V	D	R
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	V	S	R	D	C	L	K	L	G	P	P	A	E	G	E	V	V	Q	V	K	W	P
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.		S	S										T	T								T
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
																																								927	.	.	930	.	.	.	.	.	.	.	.	.	940	.	.	.	.	.	.	.	.
		431	.	.	.	.	.	.	.	.	440	.	.	.	.	.		.	.	.	.	450	.	.	.	.	.
Predicted Secondary structure																	.
Query SS confidence																	.
Query Sequence		M	N	P	S	L	V	C	V	A	S	V	T	D	V	V	.	D	S	R	F	L	V	H	F	D	D
Query Conservation																	.
Alig confidence				.	.												.
Template Conservation				.	.
Template Sequence		D	G	.	.	K	L	Y	G	A	K	Y	F	G	S	N	I	A	H	M	Y	Q	V	E	F	E	D
Template Known Secondary structure		T	S	.	.																					T	T
Template Predicted Secondary structure				.	.
Template SS confidence
		949	950			.	.	.	.	.	.	.	.	.	960	.	.	.	.	.	.	.	.	.	970	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions	Phyre2 is part of Genome3D