Job Description A2A5N8 Confidence 27.86% Date Wed Jul 10 14:39:59 BST 2013 Rank 126 Aligned Residues 54 % Identity 20% Template c2rf4B_ PDB info PDB header:transferase Chain: B: PDB Molecule:dna-directed rna polymerase i subunit rpa4; PDBTitle: crystal structure of the rna polymerase i subcomplex a14/43 Resolution 3.10 Å

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		745	.	.	.	.	750	.	.	.	.	.	.	.	.	.	760	.	.	.	.	.	.	.	.	.	770	.	.	.	.	.	.	.	.	.	780	.	.	.	.	.	.	.	.	.	790	.	.	.	.	.	.	.	.	.	800	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	V	A	G	I	S	A	S	T	V	S	K	W	T	I	E	E	V	F	G	F	V	Q	T	L	T	G	S	E	D	Q	A	R	L	F	K	D	E	M	I	D	G	E	A	F	L	L	L	T	Q	A	D	I	V	K	I	M	S	V	K
Query Conservation
Alig confidence																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		P	V	V	I	H	A	T	Q	L	P	Q	H	V	S	T	D	E	V	L	Q	F	L	E	S	F	I	D	E	K	E	N	I	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure								S	S																							S	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		19	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50
		805	.	.	.	.	810	.	.	.	.	.	.	.	.	.	820	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	G	P	A	L	K	I	Y	N	A	I	L	M	F	K	N	T	D	D	A	F	K
Query Conservation
Alig confidence
Template Conservation
Template Sequence		I	D	I	D	T	N	L	S	S	S	I	S	Q	L	K	R	I	Q	R	D	F	K
Template Known Secondary structure		S				T	T
Template Predicted Secondary structure
Template SS confidence
		51	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions	Phyre2 is part of Genome3D