Job Description A2A5N8 Confidence 100.00% Date Wed Jul 10 14:39:59 BST 2013 Rank 6 Aligned Residues 209 % Identity 41% Template c2r58A_ PDB info PDB header:transcription Chain: A: PDB Molecule:polycomb protein scm; PDBTitle: crystal structure of the two mbt repeats from sex-comb on midleg (scm)2 in complex with di-methyl lysine Resolution 2.00 Å Model Dimensions (Å) X:46.533 Y:69.445 Z:36.398

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		279	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	W	S	W	E	S	Y	L	E	E	Q	K	A	V	T	A	P	V	S	L	F	Q	D	S	Q	A	V	T	H	N	K	N	G	F	K	L	G	M	K	L	E	G	I	D	P	Q	H	P	S	M	Y	F	I	L	T	V	A	E	V	C
Query Conservation
Alig confidence																															.	.
Template Conservation																															.	.
Template Sequence		A	F	D	W	D	A	Y	L	E	E	T	G	S	E	A	A	P	A	K	C	F	K	Q	A	Q	N	P	P	N	.	.	N	D	F	K	I	G	M	K	L	E	A	L	D	P	R	N	V	T	S	T	C	I	A	T	V	V	G	V	L
Template Known Secondary structure												T	T			B			G	G	G	S	S	S		S	S				.	.					T	T								T	T
Template Predicted Secondary structure																															.	.
Template SS confidence
		174	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.			.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.
		339	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.
Predicted Secondary structure																																																												.	.
Query SS confidence																																																												.	.
Query Sequence		G	Y	R	L	R	L	H	F	D	G	Y	S	E	C	H	D	F	W	V	N	A	N	S	P	D	I	H	P	A	G	W	F	E	K	T	G	H	K	L	Q	L	P	K	G	Y	K	E	E	E	F	S	W	S	Q	Y	L	R	S	.	.
Query Conservation																																																												.	.
Alig confidence																																																												.	.
Template Conservation
Template Sequence		G	S	R	L	R	L	R	L	D	G	S	D	S	Q	N	D	F	W	R	L	V	D	S	T	E	I	H	A	I	G	H	C	E	K	N	G	G	M	L	Q	P	P	L	G	F	C	M	N	A	S	S	W	P	G	Y	L	C	K	I	L
Template Known Secondary structure		T	T							T	T	S		S	S							T	T		T	T				T	T					T	T							T	T		S	S		G	G	G
Template Predicted Secondary structure
Template SS confidence
		232	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.
		397	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	K	A	Q	A	A	P	K	H	L	F	V	S	Q	S	H	S	T	P	P	V	G	F	Q	V	G	M	K	L	E	A	V	D	R	M	N	P	S	L	V	C	V	A	S	V	T	D	V	V	D	S	R	F	L	V	H	F	D	D	W
Query Conservation
Alig confidence
Template Conservation
Template Sequence		N	N	A	M	V	A	P	E	E	I	F	Q	P	E	P	P	E	P	E	E	N	L	F	K	V	G	Q	K	L	E	A	V	D	K	K	N	P	Q	L	I	C	C	A	T	V	D	A	I	K	D	D	Q	I	H	V	T	F	D	G	W
Template Known Secondary structure		T	T			B			G	G	G	S								S	S					T	T								T	T	S	T	T												T	T							T	T	S
Template Predicted Secondary structure
Template SS confidence
		292	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.
		457	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	D	T	Y	D	Y	W	C	D	P	S	S	P	Y	I	H	P	V	G	W	C	Q	K	Q	G	K	P	L	T	P	P	Q	D
Query Conservation
Alig confidence
Template Conservation
Template Sequence		R	G	A	F	D	Y	W	C	N	Y	R	S	R	D	I	F	P	A	G	W	C	A	R	S	C	H	P	M	Q	P	P	G	H
Template Known Secondary structure			G	G	G						T	T		T	T				T	T						T				B
Template Predicted Secondary structure
Template SS confidence
		352	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions	Phyre2 is part of Genome3D