Job Description A2A5N8 Confidence 98.01% Date Wed Jul 10 14:39:59 BST 2013 Rank 48 Aligned Residues 63 % Identity 11% Template c2b6gA_ PDB info PDB header:rna binding protein Chain: A: PDB Molecule:vts1p; PDBTitle: rna recognition by the vts1 sam domain Resolution UNK

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		757	.	.	760	.	.	.	.	.	.	.	.	.	770	.	.	.	.	.	.	.	.	.	780	.	.	.	.	.	.	.	.	.	790	.	.	.	.	.	.	.	.	.	800	.	.	.		.	.	.	.	.	.	810	.	.	.	.	.
Predicted Secondary structure																																																	.
Query SS confidence																																																	.
Query Sequence		W	T	I	E	E	V	F	G	F	V	Q	T	L	T	G	S	E	D	Q	A	R	L	F	K	D	E	M	I	D	G	E	A	F	L	L	L	T	Q	A	D	I	V	K	I	M	S	V	.	K	L	G	P	A	L	K	I	Y	N	A	I
Query Conservation																																																	.
Alig confidence															.										.	.																	.						.
Template Conservation															.										.	.																	.
Template Sequence		K	L	L	K	N	I	P	M	W	L	K	S	L	.	R	L	H	K	Y	S	D	A	L	.	.	S	G	T	P	W	I	E	L	I	Y	L	D	D	E	T	L	.	E	K	K	G	V	L	A	L	G	A	R	R	K	L	L	K	A	F
Template Known Secondary structure															.	T									.	.	T	T	S						T	T							.				S
Template Predicted Secondary structure															.										.	.																	.
Template SS confidence
		451	.	.	.	.	.	.	.	.	460	.	.	.		.	.	.	.	.	.	470	.	.			.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.		.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.
		816	.	.	.	820	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	M	F	K	N	T	D	D
Query Conservation
Alig confidence
Template Conservation
Template Sequence		G	I	V	I	D	Y	K	E
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		507	.	.	510	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions	Phyre2 is part of Genome3D