Job Description A2A5N8 Confidence 97.97% Date Wed Jul 10 14:39:59 BST 2013 Rank 50 Aligned Residues 66 % Identity 20% Template c1oxjA_ PDB info PDB header:rna binding protein Chain: A: PDB Molecule:rna-binding protein smaug; PDBTitle: crystal structure of the smaug rna binding domain Resolution 1.80 Å

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		756	.	.	.	760	.	.	.	.	.	.	.	.	.	770	.	.	.	.	.	.	.	.	.	780	.	.	.	.	.	.	.	.	.	790	.	.	.	.	.	.	.	.	.	800	.	.	.	.	.	.	.	.	.	810	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	W	T	I	E	E	V	F	G	F	V	Q	T	L	T	G	S	E	D	Q	A	R	L	F	K	D	E	M	I	D	G	E	A	F	L	L	L	T	Q	A	D	I	V	K	I	M	S	V	K	L	G	P	A	L	K	I	Y	N	A	I
Query Conservation
Alig confidence																.																.	.											.
Template Conservation																.																.	.											.
Template Sequence		M	V	G	M	S	G	I	G	L	W	L	K	S	L	.	R	L	H	K	Y	I	E	L	F	K	N	M	T	Y	E	.	.	E	M	L	L	I	T	E	D	F	L	.	Q	S	V	G	V	T	K	G	A	S	H	K	L	A	L	C	I
Template Known Secondary structure			T	T		T	T								T	.	T		G	G	G	G	G	G	G	T	T					.	.			T	T							.			T	T
Template Predicted Secondary structure																.																.	.											.
Template SS confidence
		595	.	.	.	.	600	.	.	.	.	.	.	.	.		.	610	.	.	.	.	.	.	.	.	.	620	.	.	.			.	.	.	.	.	.	630	.	.	.		.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650
		816	.	.	.	820	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	M	F	K	N	T	D	D	A	F
Query Conservation
Alig confidence
Template Conservation
Template Sequence		D	K	L	K	E	R	A	N	I	L
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		651	.	.	.	.	.	.	.	.	660

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions	Phyre2 is part of Genome3D