Job Description O08908 Confidence 25.76% Date Wed Jul 10 14:15:46 BST 2013 Rank 416 Aligned Residues 83 % Identity 12% Template c4h61A_ PDB info PDB header:transcription Chain: A: PDB Molecule:mediator of rna polymerase ii transcription subunit 6; PDBTitle: structure of the schizosaccharomyces pombe mediator subunit med6 Resolution 2.70 Å

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		618	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	G	K	I	N	R	T	Q	A	E	E	M	L	S	G	K	R	D	G	T	F	L	I	R	E	S	S	Q	R	G	C	Y	A	C	S	V	V	V	D	G	D	T	K	H	C	V	I	Y	R	T	A	T	G	F	G	F	A	E	P	Y
Query Conservation
Alig confidence																																				.	.	.	.
Template Conservation																																				.	.	.	.
Template Sequence		F	N	A	L	D	L	G	D	L	N	S	Q	L	K	R	L	T	G	I	Q	F	V	I	I	H	E	R	P	P	F	L	W	V	I	.	.	.	.	Q	K	Q	N	R	L	N	E	N	E	V	K	P	L	T	V	Y	F	V	C	N	E
Template Known Secondary structure			T	T												T													T	T	T					.	.	.	.							S	S	S												T	T
Template Predicted Secondary structure																																				.	.	.	.
Template SS confidence
		58	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.					.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.
		678	.	680			.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700	.	.	.	.
Predicted Secondary structure					.	.
Query SS confidence					.	.
Query Sequence		N	L	Y	.	.	G	S	L	K	E	L	V	L	H	Y	Q	H	A	S	L	V	Q	H	N	D	A	L	T	V
Query Conservation					.	.
Alig confidence					.	.
Template Conservation
Template Sequence		N	I	Y	M	A	P	N	A	Y	T	L	L	A	T	R	M	L	N	A	T	Y	C	F	Q	K	A	L	T	K
Template Known Secondary structure																													T	T
Template Predicted Secondary structure
Template SS confidence
		114	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions	Phyre2 is part of Genome3D