Return to main results Retrieve Phyre Job Id

Job DescriptionO08908
Confidence95.85%DateWed Jul 10 14:15:46 BST 2013
Rank333Aligned Residues57
% Identity35%Templatec3pvlA_
PDB info PDB header:motor protein/protein transportChain: A: PDB Molecule:myosin viia isoform 1; PDBTitle: structure of myosin viia myth4-ferm-sh3 in complex with the cen1 of2 sans
Resolution2.80 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   10.........20.........30.........40.........50.........60.........
Predicted Secondary structure 












































Query SS confidence 



























































Query Sequence  RAVYPFRRERPEDLELLPGDLLVVSRVALQALGVADGGERCPHNVGWMPGFNERTRQRGD
Query Conservation                     
   
                 
    
  
      
 
 
Alig confidence 





..
























..........
















Template Conservation   

   ..   
 


  



 
    
    ..........      
     
  
 
Template Sequence  VALQDN. . PNSGFLSFAKGDLIILDHDTGEQVM. . . . . . . . . . NSGWANGINERTKQRGD
Template Known Secondary structure  SS

..



B



TT
SS

..........SSTTT

Template Predicted Secondary structure 

..















..........
















Template SS confidence 



























































   1571..... ...1580.........1590.........1600. ........1610........
 
   70........
Predicted Secondary structure 


Query SS confidence 








Query Sequence  FPGTYVEFL
Query Conservation 

   
   
Alig confidence 








Template Conservation 

   
   
Template Sequence  FPTDCVYVM
Template Known Secondary structure  GGG
Template Predicted Secondary structure 


Template SS confidence 








   1624.....1630..
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions
Phyre2 is part of Genome3D