Job Description O08908 Confidence 99.95% Date Wed Jul 10 14:15:46 BST 2013 Rank 27 Aligned Residues 175 % Identity 17% Template c3msxB_ PDB info PDB header:protein binding Chain: B: PDB Molecule:rho gtpase-activating protein 20; PDBTitle: crystal structure of rhoa.gdp.mgf3 in complex with gap domain of2 arhgap20 Resolution 1.65 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		104	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.									.	.	150	.	.	.	.	.
Predicted Secondary structure																																														.	.	.	.	.	.	.	.
Query SS confidence																																														.	.	.	.	.	.	.	.
Query Sequence		S	S	E	S	G	H	I	L	P	D	L	A	E	Q	F	S	P	P	D	P	A	P	P	I	L	V	K	L	V	E	A	I	E	Q	A	E	L	D	S	E	C	Y	S	K	.	.	.	.	.	.	.	.	P	E	L	P	A	T	R	T
Query Conservation																																														.	.	.	.	.	.	.	.
Alig confidence																		.	.	.	.																									.	.	.	.	.	.	.	.
Template Conservation																		.	.	.	.
Template Sequence		G	Q	L	F	G	I	S	L	P	N	I	C	E	N	D	N	.	.	.	.	L	P	K	P	V	L	D	M	L	F	F	L	N	Q	K	G	P	L	T	K	G	I	F	R	Q	S	A	N	V	K	S	C	R	E	L	K	E	K	L	N
Template Known Secondary structure					T	T	S						S	G	G	G		.	.	.	.																G	G	G	S	T	T	T	T	T	S
Template Predicted Secondary structure																		.	.	.	.
Template SS confidence
		360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.					.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.
		156	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.				200	.	.	.	.	.	.	.	.	.	210	.	.
Predicted Secondary structure																																														.	.	.
Query SS confidence																																														.	.	.
Query Sequence		D	W	S	L	S	D	L	E	Q	W	D	R	T	A	L	Y	D	A	V	K	G	F	L	L	A	L	P	A	A	V	V	T	P	E	A	A	A	E	A	Y	R	A	L	R	.	.	.	E	V	A	G	P	V	G	L	V	L	E	P	P
Query Conservation																																														.	.	.
Alig confidence																																														.	.	.
Template Conservation
Template Sequence		S	G	V	E	V	H	L	D	C	E	S	I	F	V	I	A	S	V	L	K	D	F	L	R	N	I	P	G	S	I	F	S	S	D	L	Y	D	H	W	V	S	V	M	D	Q	G	N	D	E	E	K	I	N	T	V	Q	R	L	L	D
Template Known Secondary structure			T					T	T	S	S															T	S	T	T	T	T	T	T	G	G	G							G	G	G	S	S	S													T
Template Predicted Secondary structure
Template SS confidence
		416	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.
		213	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270		.
Predicted Secondary structure																																																												.
Query SS confidence																																																												.
Query Sequence		T	L	P	L	H	Q	A	L	T	L	R	F	L	L	Q	H	L	G	R	V	A	R	R	A	P	S	P	D	T	A	V	H	A	L	A	S	A	F	G	P	L	L	L	R	I	P	P	S	G	G	E	G	D	G	S	E	P	V	.	P
Query Conservation																																																												.
Alig confidence																																														.	.													.
Template Conservation																																														.	.
Template Sequence		Q	L	P	R	A	N	V	V	L	L	R	Y	L	F	G	V	L	H	N	I	E	Q	H	S	S	S	N	Q	M	T	A	F	N	L	A	V	C	V	A	P	S	I	L	W	.	.	P	P	A	S	S	S	P	E	L	E	N	E	F	T
Template Known Secondary structure		T	S																				T	T																						.	.			T	T	S
Template Predicted Secondary structure																																														.	.
Template SS confidence
		476	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.			520	.	.	.	.	.	.	.	.	.	530	.	.	.
		272	.	.	.	.	.	.	.	280	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	F	P	V	L	L	L	E	R	L	V	Q	E
Query Conservation
Alig confidence
Template Conservation
Template Sequence		K	K	V	S	L	L	I	Q	F	L	I	E	N
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		534	.	.	.	.	.	540	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions	Phyre2 is part of Genome3D