Job Description O08908 Confidence 99.96% Date Wed Jul 10 14:15:46 BST 2013 Rank 23 Aligned Residues 175 % Identity 16% Template c3kuqA_ PDB info PDB header:hydrolase activator Chain: A: PDB Molecule:rho gtpase-activating protein 7; PDBTitle: crystal structure of the dlc1 rhogap domain Resolution 2.30 Å

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		105	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.									.	.	150	.	.	.	.	.	.
Predicted Secondary structure																																													.	.	.	.	.	.	.	.
Query SS confidence																																													.	.	.	.	.	.	.	.
Query Sequence		S	E	S	G	H	I	L	P	D	L	A	E	Q	F	S	P	P	D	P	A	P	P	I	L	V	K	L	V	E	A	I	E	Q	A	E	L	D	S	E	C	Y	S	K	.	.	.	.	.	.	.	.	P	E	L	P	A	T	R	T	D
Query Conservation																																													.	.	.	.	.	.	.	.
Alig confidence															.	.																													.	.	.	.	.	.	.	.
Template Conservation															.	.
Template Sequence		S	V	F	G	V	P	L	T	V	N	V	Q	R	.	.	T	G	Q	P	L	P	Q	S	I	Q	Q	A	M	R	Y	L	R	N	H	C	L	D	Q	V	G	L	F	R	K	S	G	V	K	S	R	I	Q	A	L	R	Q	M	N	E	G
Template Known Secondary structure		S	S	T	T										.	.		S	S	S	S																T	T	S	T	T	T	T	T	S															T	B
Template Predicted Secondary structure															.	.
Template SS confidence
		1074	.	.	.	.	.	1080	.	.	.	.	.	.			.	.	.	1090	.	.	.	.	.	.	.	.	.	1100	.	.	.	.	.	.	.	.	.	1110	.	.	.	.	.	.	.	.	.	1120	.	.	.	.	.	.	.	.	.	1130	.
		157		.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.				.	.	200	.	.	.	.	.	.	.	.	.	210	.	.
Predicted Secondary structure			.																																									.	.	.
Query SS confidence			.																																									.	.	.
Query Sequence		W	.	S	L	S	D	L	E	Q	W	D	R	T	A	L	Y	D	A	V	K	G	F	L	L	A	L	P	A	A	V	V	T	P	E	A	A	A	E	A	Y	R	A	.	.	.	L	R	E	V	A	G	P	V	G	L	V	L	E	P	P
Query Conservation			.																																									.	.	.
Alig confidence			.																																									.	.	.
Template Conservation
Template Sequence		A	I	D	C	V	N	Y	E	G	Q	S	A	Y	D	V	A	D	M	L	K	Q	Y	F	R	D	L	P	E	P	L	M	T	N	K	L	S	E	T	F	L	Q	I	Y	Q	Y	V	P	K	D	Q	R	L	Q	A	I	K	A	A	I	M
Template Known Secondary structure		S	S	S					T	T																	S	S	S		T	T		S	S												S		G	G	G
Template Predicted Secondary structure
Template SS confidence
		1132	.	.	.	.	.	.	.	1140	.	.	.	.	.	.	.	.	.	1150	.	.	.	.	.	.	.	.	.	1160	.	.	.	.	.	.	.	.	.	1170	.	.	.	.	.	.	.	.	.	1180	.	.	.	.	.	.	.	.	.	1190	.
		213	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	L	P	L	H	Q	A	L	T	L	R	F	L	L	Q	H	L	G	R	V	A	R	R	A	P	S	P	D	T	A	V	H	A	L	A	S	A	F	G	P	L	L	L	R	I	P	P	S	G	G	E	G	D	G	S	E	P	V	P	D
Query Conservation
Alig confidence																																														.	.
Template Conservation																																														.	.
Template Sequence		L	L	P	D	E	N	R	E	V	L	Q	T	L	L	Y	F	L	S	D	V	T	A	A	V	K	E	N	Q	M	T	P	T	N	L	A	V	C	L	A	P	S	L	F	H	.	.	L	N	T	L	D	Q	K	D	L	N	E	N	L	A
Template Known Secondary structure		T	S																					T																					T	.	.
Template Predicted Secondary structure																																														.	.
Template SS confidence
		1192	.	.	.	.	.	.	.	1200	.	.	.	.	.	.	.	.	.	1210	.	.	.	.	.	.	.	.	.	1220	.	.	.	.	.	.	.	.	.	1230	.	.	.	.	.			.	.	.	.	1240	.	.	.	.	.	.	.	.	.
		273	.	.	.	.	.	.	280	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	P	V	L	L	L	E	R	L	V	Q
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	T	Q	G	L	A	H	M	I	A	E
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		1269	1270	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions	Phyre2 is part of Genome3D