Job Description O08908 Confidence 98.55% Date Wed Jul 10 14:15:46 BST 2013 Rank 168 Aligned Residues 57 % Identity 26% Template c3jv3A_ PDB info PDB header:protein binding Chain: A: PDB Molecule:intersectin-1; PDBTitle: structure of sh3e-dh unit of murine intersectin-1l Resolution 2.40 Å

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		8	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	Y	R	A	V	Y	P	F	R	R	E	R	P	E	D	L	E	L	L	P	G	D	L	L	V	V	S	R	V	A	L	Q	A	L	G	V	A	D	G	G	E	R	C	P	H	N	V	G	W	M	P	G	F	N	E	R	T	R	Q	R
Query Conservation
Alig confidence																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.						.	.
Template Conservation																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.						.	.
Template Sequence		Q	V	I	G	M	Y	D	Y	T	A	Q	N	D	D	E	L	A	F	S	K	G	Q	I	I	N	V	L	N	K	E	D	P	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	W	W	K	G	.	.	E	V	S	G	Q	V
Template Known Secondary structure						S	S		B			S	S	T	T	B			B		T	T										S	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T					.	.			T	T
Template Predicted Secondary structure																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.						.	.
Template SS confidence
		1152	.	.	.	.	.	.	.	1160	.	.	.	.	.	.	.	.	.	1170	.	.	.	.	.	.	.	.	.	1180	.	.	.																.	.	.	.	.			.	1190	.	.	.	.
		68	.	70	.	.	.	.	.	.	.	.	.	80	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	D	F	P	G	T	Y	V	E	F	L	G	P	V
Query Conservation
Alig confidence
Template Conservation
Template Sequence		G	L	F	P	S	N	Y	V	K	L	T	T	D	M
Template Known Secondary structure						G	G	G				G	G	G	S
Template Predicted Secondary structure
Template SS confidence
		1195	.	.	.	.	1200	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions	Phyre2 is part of Genome3D