Job Description O08908 Confidence 99.95% Date Wed Jul 10 14:15:46 BST 2013 Rank 24 Aligned Residues 172 % Identity 19% Template c3fk2B_ PDB info PDB header:signaling protein, hydrolase activator Chain: B: PDB Molecule:glucocorticoid receptor dna-binding factor 1; PDBTitle: crystal structure of the rhogap domain of human2 glucocorticoid receptor dna-binding factor 1 Resolution 2.80 Å

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		108	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.									.	.	150	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																										.	.	.	.	.	.	.	.
Query SS confidence																																										.	.	.	.	.	.	.	.
Query Sequence		G	H	I	L	P	D	L	A	E	Q	F	S	P	P	D	P	A	P	P	I	L	V	K	L	V	E	A	I	E	Q	A	E	L	D	S	E	C	Y	S	K	.	.	.	.	.	.	.	.	P	E	L	P	A	T	R	T	D	W	S	L
Query Conservation																																										.	.	.	.	.	.	.	.
Alig confidence																																										.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		N	Y	F	G	V	P	L	T	T	V	V	T	P	E	K	P	I	P	I	F	I	E	R	C	I	E	Y	I	E	A	T	G	L	S	T	E	G	I	Y	R	V	S	G	N	K	S	E	M	E	S	L	Q	R	Q	F	D	Q	D	H	N
Template Known Secondary structure		S	S	T	T	S		G	G	G	G			S	S	S		S																T	T	S	T	T	T	T	T	S																		T	T
Template Predicted Secondary structure
Template SS confidence
		1245	.	.	.	.	1250	.	.	.	.	.	.	.	.	.	1260	.	.	.	.	.	.	.	.	.	1270	.	.	.	.	.	.	.	.	.	1280	.	.	.	.	.	.	.	.	.	1290	.	.	.	.	.	.	.	.	.	1300	.	.	.	.
		160	.	.	.	.	.			.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.				.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.
Predicted Secondary structure								.	.																																	.	.	.
Query SS confidence								.	.																																	.	.	.
Query Sequence		S	D	L	E	Q	W	.	.	D	R	T	A	L	Y	D	A	V	K	G	F	L	L	A	L	P	A	A	V	V	T	P	E	A	A	A	E	A	Y	R	A	.	.	.	L	R	E	V	A	G	P	V	G	L	V	L	E	P	P	T	L
Query Conservation								.	.																																	.	.	.
Alig confidence								.	.																																	.	.	.
Template Conservation
Template Sequence		L	D	L	A	E	K	D	F	T	V	N	T	V	A	G	A	M	K	S	F	F	S	E	L	P	D	P	L	V	P	Y	N	M	Q	I	D	L	V	E	A	H	K	I	N	D	R	E	Q	K	L	H	A	L	K	E	V	L	K	K	F
Template Known Secondary structure				S	G	G	G	T																	S	S	S		S	S												T	T			S														T	S
Template Predicted Secondary structure
Template SS confidence
		1305	.	.	.	.	1310	.	.	.	.	.	.	.	.	.	1320	.	.	.	.	.	.	.	.	.	1330	.	.	.	.	.	.	.	.	.	1340	.	.	.	.	.	.	.	.	.	1350	.	.	.	.	.	.	.	.	.	1360	.	.	.	.
		215	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	L	H	Q	A	L	T	L	R	F	L	L	Q	H	L	G	R	V	A	R	R	A	P	S	P	D	T	A	V	H	A	L	A	S	A	F	G	P	L	L	L	R	I	P	P	S	G	G	E	G	D	G	S	E	P	V	P	D	F	P
Query Conservation
Alig confidence																																																.	.	.	.	.	.
Template Conservation																																																.	.	.	.	.	.
Template Sequence		P	K	E	N	H	E	V	F	K	Y	V	I	S	H	L	N	K	V	S	H	N	N	K	V	N	L	M	T	S	E	N	L	S	I	C	F	W	P	T	L	M	R	P	D	M	D	.	.	.	.	.	.	A	L	T	A	T	R	T	Y
Template Known Secondary structure																					T	T																										.	.	.	.	.	.
Template Predicted Secondary structure																																																.	.	.	.	.	.
Template SS confidence
		1365	.	.	.	.	1370	.	.	.	.	.	.	.	.	.	1380	.	.	.	.	.	.	.	.	.	1390	.	.	.	.	.	.	.	.	.	1400	.	.	.	.	.	.	.	.	.	1410							.	.	.	.	.	.	.	.
		275	.	.	.	.	280	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	L	L	L	E	R	L	V	Q	E	H
Query Conservation
Alig confidence
Template Conservation
Template Sequence		Q	T	I	I	E	L	F	I	Q	Q	C
Template Known Secondary structure											T
Template Predicted Secondary structure
Template SS confidence
		1422	.	.	.	.	.	.	.	1430	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions	Phyre2 is part of Genome3D