Job Description O08908 Confidence 99.91% Date Wed Jul 10 14:15:46 BST 2013 Rank 39 Aligned Residues 168 % Identity 17% Template c3eapD_ PDB info PDB header:hydrolase activator Chain: D: PDB Molecule:rho gtpase-activating protein 11a; PDBTitle: crystal structure of the rhogap domain of arhgap11a Resolution 2.30 Å

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		102	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.		.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.		.	.	150	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																		.																															.
Query SS confidence																		.																															.
Query Sequence		D	G	S	S	E	S	G	H	I	L	P	D	L	A	E	Q	.	F	S	P	P	D	P	A	P	P	I	L	V	K	L	V	E	A	I	E	Q	A	E	L	D	S	E	C	Y	S	K	.	P	E	L	P	A	T	R	T	D	W	S	L
Query Conservation																		.																															.
Alig confidence																		.																						.		.							.											.	.
Template Conservation																																								.		.																		.	.
Template Sequence		K	V	G	K	I	F	G	V	P	F	N	A	L	P	H	S	A	V	P	E	Y	G	H	I	P	S	F	L	V	D	A	C	T	S	L	E	D	H	.	I	.	H	T	S	V	I	R	L	K	A	L	K	N	K	V	D	H	G	.	.
Template Known Secondary structure						S	T	T			T	T	T	S						T	T	T																T	T	.	T	.	T																	.	.
Template Predicted Secondary structure																																								.		.																		.	.
Template SS confidence
		22	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.		60		.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.
		160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.			200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.
Predicted Secondary structure																																										.	.
Query SS confidence																																										.	.
Query Sequence		S	D	L	E	Q	W	D	R	T	A	L	Y	D	A	V	K	G	F	L	L	A	L	P	A	A	V	V	T	P	E	A	A	A	E	A	Y	R	A	L	R	.	.	E	V	A	G	P	V	G	L	V	L	E	P	P	T	L	P	L	H
Query Conservation																																										.	.
Alig confidence		.	.	.	.	.	.																																			.	.
Template Conservation		.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	P	P	C	D	I	A	G	L	L	K	Q	F	F	R	E	L	P	E	P	I	L	P	A	D	L	H	E	A	L	L	K	A	Q	Q	L	G	T	E	E	K	N	K	A	T	L	L	L	S	C	L	L	A	D	H
Template Known Secondary structure		.	.	.	.	.	.															T	S	S	S		S	S		G	G	G									T	S		T	T											T	T	S
Template Predicted Secondary structure		.	.	.	.	.	.
Template SS confidence
								113	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.
		218	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	A	L	T	L	R	F	L	L	Q	H	L	G	R	V	A	R	R	A	P	S	P	D	T	A	V	H	A	L	A	S	A	F	G	P	L	L	L	R	I	P	P	S	G	G	E	G	D	G	S	E	P	V	P	D	F	P	V	L	L
Query Conservation
Alig confidence																																													.	.	.	.	.	.
Template Conservation																																													.	.	.	.	.	.
Template Sequence		T	V	H	V	L	R	Y	F	F	N	F	L	R	N	V	S	L	R	S	S	E	N	K	M	D	S	S	N	L	A	V	I	F	A	P	N	L	L	Q	T	S	S	N	.	.	.	.	.	.	T	E	K	K	L	R	L	Q	A	A	V
Template Known Secondary structure																			T																					T					.	.	.	.	.	.
Template Predicted Secondary structure																																													.	.	.	.	.	.
Template SS confidence
		167	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.							210	.	.	.	.	.	.	.	.	.	220
		278	.	280	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	E	R	L	V	Q	E	H
Query Conservation
Alig confidence
Template Conservation
Template Sequence		V	Q	T	L	I	D	Y	A
Template Known Secondary structure								T	G
Template Predicted Secondary structure
Template SS confidence
		228	.	230	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions	Phyre2 is part of Genome3D