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Job DescriptionO08908
Confidence95.42%DateWed Jul 10 14:15:46 BST 2013
Rank334Aligned Residues134
% Identity70%Templatec2rd0B_
PDB info PDB header:transferase/oncoproteinChain: B: PDB Molecule:phosphatidylinositol 3-kinase regulatory subunit alpha; PDBTitle: structure of a human p110alpha/p85alpha complex
Resolution3.05 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   433......440.........450.........460.........470.........480.........490..
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Query Sequence  IEAVGAQLKVYHQQYQDKSREYDQLYEEYTRTSQELQMKRTAIEAFNETIKIFEEQGQTQ
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Template Conservation 

 
   
 
    
 
   
 
 
          
                  
     
Template Sequence  IEAVGKKLHEYNTQFQEKSREYDRLYEEYTRTSQEIQMKRTAIEAFNETIKIFEEQCQTQ
Template Known Secondary structure 

SS
TTTT
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   442.......450.........460.........470.........480.........490.........500.
 
   493......500.........510.........520.........530.........540.........550..
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Query Sequence  EKCSKEYLERFRREGNEKEMQRILLNSERLKSRIAEIHESRTKLEQDLRAQASDNREIDK
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Template Conservation      ........... 
     
  
   
   
  
      
   
         
  
Template Sequence  ERYS. . . . . . . . . . . KEYIIQRIMHNYDKLKSRISEIIDSRRRLEEDLKKQAAEYREIDK
Template Known Secondary structure  TTTT...........TTT





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   502... ....510.........520.........530.........540.........550
 
   553......560.........570.......
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Query Sequence  RMNSLKPDLMQLRKIRDQYLVWLTQ
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Template Conservation      
  

  
     
       
Template Sequence  RMNSIKPDLIQLRKTRDQYLMWKLN
Template Known Secondary structure  TTS





Template Predicted Secondary structure 
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   562.......570.........580......
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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