Job Description O08908 Confidence 98.42% Date Wed Jul 10 14:15:46 BST 2013 Rank 234 Aligned Residues 58 % Identity 29% Template c2nwmA_ PDB info PDB header:cell adhesion Chain: A: PDB Molecule:vinexin; PDBTitle: solution structure of the first sh3 domain of human vinexin2 and its interaction with the peptides from vinculin Resolution UNK

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		6	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	F	Q	Y	R	A	V	Y	P	F	R	R	E	R	P	E	D	L	E	L	L	P	G	D	L	L	V	V	S	R	V	A	L	Q	A	L	G	V	A	D	G	G	E	R	C	P	H	N	V	G	W	M	P	G	F	N	E	R	T	R
Query Conservation
Alig confidence																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.						.	.
Template Conservation																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.						.	.
Template Sequence		M	K	A	A	R	L	K	F	D	F	Q	A	Q	S	P	K	E	L	T	L	Q	K	G	D	I	V	Y	I	H	K	E	V	D	K	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	N	W	L	E	G	.	.	E	H	H	G
Template Known Secondary structure									S		B				S	T	T	B			B		T	T										T	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T					.	.			T	T
Template Predicted Secondary structure																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.						.	.
Template SS confidence
		0	.	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.																.	.	.	.	.			.	40	.	.
		66	.	.	.	70	.	.	.	.	.	.	.	.	.	80
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	R	G	D	F	P	G	T	Y	V	E	F	L	G	P
Query Conservation
Alig confidence
Template Conservation
Template Sequence		R	L	G	I	F	P	A	N	Y	V	E	V	L	P	L
Template Known Secondary structure								G	G	G
Template Predicted Secondary structure
Template SS confidence
		43	.	.	.	.	.	.	50	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions	Phyre2 is part of Genome3D