Job Description O08908 Confidence 98.43% Date Wed Jul 10 14:15:46 BST 2013 Rank 228 Aligned Residues 56 % Identity 29% Template c2j06B_ PDB info PDB header:signal transduction Chain: B: PDB Molecule:ras gtpase-activating protein 1; PDBTitle: crystal structure of the rasgap sh3 domain at 1.8 angstrom2 resolution Resolution 1.8 Å

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		8	.	10	.	.	.	.	.	.	.	.	.		20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.
Predicted Secondary structure														.
Query SS confidence														.
Query Sequence		Q	Y	R	A	V	Y	P	F	R	R	E	R	.	P	E	D	L	E	L	L	P	G	D	L	L	V	V	S	R	V	A	L	Q	A	L	G	V	A	D	G	G	E	R	C	P	H	N	V	G	W	M	P	G	F	N	E	R	T	R	Q
Query Conservation														.
Alig confidence														.																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		R	V	R	A	I	L	P	Y	T	K	V	P	D	T	D	E	I	S	F	L	K	G	D	X	F	I	V	H	N	E	L	E	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	W	X	W	V	T	N	L	R	T	D	E
Template Known Secondary structure						S	S		B				T	T	S	S	B			B		T	T										G	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G							T	T	T
Template Predicted Secondary structure																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		283	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.																.	.	.	.	320	.	.	.	.	.	.	.
		67	.	.	70	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	G	D	F	P	G	T	Y	V	E	F	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		Q	G	L	I	V	E	D	L	V	E	E	V
Template Known Secondary structure							G	G	G
Template Predicted Secondary structure
Template SS confidence
		328	.	330	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions	Phyre2 is part of Genome3D