Job Description O08908 Confidence 98.25% Date Wed Jul 10 14:15:46 BST 2013 Rank 277 Aligned Residues 63 % Identity 19% Template c2csqA_ PDB info PDB header:endocytosis/exocytosis Chain: A: PDB Molecule:rim binding protein 2; PDBTitle: solution structure of the second sh3 domain of human rim-2 binding protein 2 Resolution UNK

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Show / Hide Conservation and Alignment quality

		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.									20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.
Predicted Secondary structure																					.	.	.	.	.	.	.	.
Query SS confidence																					.	.	.	.	.	.	.	.
Query Sequence		M	A	G	A	E	G	F	Q	Y	R	A	V	Y	P	F	R	R	E	R	.	.	.	.	.	.	.	.	P	E	D	L	E	L	L	P	G	D	L	L	V	V	S	R	V	A	L	Q	A	L	G	V	A	D	G	G	E	R	C	P	H
Query Conservation																					.	.	.	.	.	.	.	.
Alig confidence																					.	.	.	.	.	.	.	.																						.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																		.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		A	E	E	L	P	A	R	I	F	V	A	L	F	D	Y	D	P	L	T	M	S	P	N	P	D	A	A	E	E	E	L	P	F	K	E	G	Q	I	I	K	V	Y	G	D	K	D	A	D	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure		S											S	S		B		T	T	T	T	S	S						T	T	B			B		T	T											T	T	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																		.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		12	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.
		53	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	V	G	W	M	P	G	F	N	E	R	T	R	Q	R	G	D	F	P	G	T	Y	V	E	F	L	G
Query Conservation
Alig confidence		.	.						.	.
Template Conservation		.	.						.	.
Template Sequence		.	.	G	F	Y	R	G	.	.	E	T	C	A	R	L	G	L	I	P	C	N	M	V	S	E	I	Q
Template Known Secondary structure		.	.						.	.			T	T							T	T	T	S
Template Predicted Secondary structure		.	.						.	.
Template SS confidence
				60	.	.	.	.			.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions	Phyre2 is part of Genome3D