Job Description O08908 Confidence 98.14% Date Wed Jul 10 14:15:46 BST 2013 Rank 300 Aligned Residues 58 % Identity 14% Template c1u3oA_ PDB info PDB header:signaling protein Chain: A: PDB Molecule:huntingtin-associated protein-interacting PDBTitle: solution structure of rat kalirin n-terminal sh3 domain Resolution UNK

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		8	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.			60	.	.	.	.	.
Predicted Secondary structure																																																						.	.
Query SS confidence																																																						.	.
Query Sequence		Q	Y	R	A	V	Y	P	F	R	R	E	R	P	E	D	L	E	L	L	P	G	D	L	L	V	V	S	R	V	A	L	Q	A	L	G	V	A	D	G	G	E	R	C	P	H	N	V	G	W	M	P	G	.	.	F	N	E	R	T	R
Query Conservation																																																						.	.
Alig confidence																																	.	.	.	.	.	.	.	.	.	.	.	.	.									.	.
Template Conservation																																	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		L	T	V	V	L	Q	D	F	S	A	A	H	S	S	E	L	S	I	Q	V	G	Q	T	V	E	L	L	E	R	P	S	.	.	.	.	.	.	.	.	.	.	.	.	.	E	R	P	G	W	C	L	V	R	T	T	E	R	S	P	P
Template Known Secondary structure						S	S		B				S	T	T				B		T	T						S	S		T	T	.	.	.	.	.	.	.	.	.	.	.	.	.	S	S	T	T							S	S	S	S	S
Template Predicted Secondary structure																																	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		19	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.														50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.
		66	.	.	.	70	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	R	G	D	F	P	G	T	Y	V	E	F	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		Q	E	G	L	V	P	S	S	T	L	C	I	S
Template Known Secondary structure								G	G	G	S
Template Predicted Secondary structure
Template SS confidence
		66	.	.	.	70	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions	Phyre2 is part of Genome3D