Job Description O08908 Confidence 50.56% Date Wed Jul 10 14:15:46 BST 2013 Rank 386 Aligned Residues 129 % Identity 18% Template c1tueG_ PDB info PDB header:replication Chain: G: PDB Molecule:regulatory protein e2; PDBTitle: the x-ray structure of the papillomavirus helicase in2 complex with its molecular matchmaker e2 Resolution 2.10 Å

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		520	.	.	.	.	.	.	.	.	.	530	.	.	.					.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.		.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.
Predicted Secondary structure																.	.	.	.																										.
Query SS confidence																.	.	.	.																										.
Query Sequence		E	R	L	K	S	R	I	A	E	I	H	E	S	R	.	.	.	.	T	K	L	E	Q	D	L	R	A	Q	A	S	D	N	R	E	I	D	K	R	M	N	S	L	K	.	P	D	L	M	Q	L	R	K	I	R	D	Q	Y	L	V	W
Query Conservation																.	.	.	.																										.
Alig confidence																.	.	.	.																										.
Template Conservation
Template Sequence		E	T	L	S	E	R	L	S	A	L	Q	D	K	I	I	D	H	Y	E	N	D	S	K	D	I	D	S	Q	I	Q	Y	W	Q	L	I	R	W	E	N	A	I	F	F	A	A	R	E	H	G	I	Q	T	L	N	H	Q	V	V	P	A
Template Known Secondary structure																																																	T	T					T	T
Template Predicted Secondary structure
Template SS confidence
		6	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.
		575	.	.	.	.	580	.	.		.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.
Predicted Secondary structure										.
Query SS confidence										.
Query Sequence		L	T	Q	K	G	A	R	Q	.	R	K	I	N	E	W	L	G	I	K	N	E	T	E	D	Q	Y	S	L	M	E	D	E	D	A	L	P	H	H	E	E	R	T	W	Y	V	G	K	I	N	R	T	Q	A	E	E	M	L	S	G	K
Query Conservation										.
Alig confidence										.																						.	.	.	.	.	.	.	.	.	.	.	.									.	.	.	.
Template Conservation																																.	.	.	.	.	.	.	.	.	.	.	.									.	.	.	.
Template Sequence		Y	N	I	S	K	S	K	A	H	K	A	I	E	L	Q	M	A	L	Q	G	L	A	Q	S	A	Y	K	T	E	D	.	.	.	.	.	.	.	.	.	.	.	.	W	T	L	Q	D	T	C	E	.	.	.	.	E	L	W	N	T	E
Template Known Secondary structure																							T	T	S	G	G	G	G	S		.	.	.	.	.	.	.	.	.	.	.	.			T	T	T	T			.	.	.	.				T	S	S
Template Predicted Secondary structure																																.	.	.	.	.	.	.	.	.	.	.	.									.	.	.	.
Template SS confidence
		66	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.													.	.	.	.	100	.	.	.					.	.	.	.	.	.
		634	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.									.	.	660	.	.	.	.	.	.	.	.	.	670
Predicted Secondary structure																										.	.	.	.	.	.	.	.
Query SS confidence																										.	.	.	.	.	.	.	.
Query Sequence		R	D	G	T	F	L	I	R	E	S	S	Q	R	G	C	Y	A	C	S	V	V	V	D	G	.	.	.	.	.	.	.	.	D	T	K	H	C	V	I	Y	R	T	A	T	G
Query Conservation																										.	.	.	.	.	.	.	.
Alig confidence							.	.	.	.	.	.														.	.	.	.	.	.	.	.
Template Conservation							.	.	.	.	.	.
Template Sequence		P	T	H	C	F	.	.	.	.	.	.	K	K	G	G	Q	T	V	Q	V	Y	F	D	G	N	K	D	N	C	M	T	Y	V	A	W	D	S	V	Y	Y	M	T	D	A	G
Template Known Secondary structure		S	T	T	S		.	.	.	.	.	.												T	T		T	T	S								S							T	T	S
Template Predicted Secondary structure							.	.	.	.	.	.
Template SS confidence
		110	.	.	.	.							.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions	Phyre2 is part of Genome3D