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Job DescriptionO08908
Confidence97.58%DateWed Jul 10 14:15:46 BST 2013
Rank321Aligned Residues60
% Identity18%Templatec1t0jA_
PDB info PDB header:signaling proteinChain: A: PDB Molecule:voltage-gated calcium channel subunit beta2a; PDBTitle: crystal structure of a complex between voltage-gated calcium channel2 beta2a subunit and a peptide of the alpha1c subunit
Resolution2.00 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   2.......10.........20.. .......30.........40.........50....
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Query Sequence  AGAEGFQYRAVYPFRRERPED. . . . . . . LELLPGDLLVVSRVALQALGVADGGERCPHNV
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Template Sequence  TKPVAFAVRTNVRYSAAQEDDVPVPGMAISFEAKDFLHVKEKFNN. . . . . . . . . . . . . . .
Template Known Secondary structure  TS



SS
B


GGG

SSTT
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B
TT
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   57..60.........70.........80.........90.........100.
 
   55....60. ........70......
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Query Sequence  GWMPGFN. ERTRQRGDFPGTYVE
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Template Sequence  DWWIGRLVKEGCEIGFIPSPVKL
Template Known Secondary structure  TSSTT



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   102.......110.........120....
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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