Job Description O08908 Confidence 62.27% Date Wed Jul 10 14:15:46 BST 2013 Rank 371 Aligned Residues 56 % Identity 14% Template c1q88B_ PDB info PDB header:dna binding protein Chain: B: PDB Molecule:39 kda initiator binding protein; PDBTitle: crystal structure of the c-domain of the t.vaginalis inr2 binding protein, ibp39 (monoclinic form) Resolution 2.42 Å

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		650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.				.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700	.	.	.	.	.	.
Predicted Secondary structure																		.	.	.
Query SS confidence																		.	.	.
Query Sequence		A	C	S	V	V	V	D	G	D	T	K	H	C	V	I	Y	.	.	.	R	T	A	T	G	F	G	F	A	E	P	Y	N	L	Y	G	S	L	K	E	L	V	L	H	Y	Q	H	A	S	L	V	Q	H	N	D	A	L	T	V	T	L
Query Conservation																		.	.	.
Alig confidence																		.	.	.																									.	.	.	.	.	.	.	.	.
Template Conservation																																													.	.	.	.	.	.	.	.	.
Template Sequence		C	L	I	L	K	T	P	T	G	I	R	K	I	W	N	K	P	L	I	E	A	T	G	Q	Y	L	M	D	E	N	G	E	K	Y	D	S	W	D	K	Y	F	E	M	.	.	.	.	.	.	.	.	.	K	P	I	E	T	Y	L	T
Template Known Secondary structure								T	T									T	T	S		T	T	S						T	T					S									.	.	.	.	.	.	.	.	.	S			G	G	G	S
Template Predicted Secondary structure																																													.	.	.	.	.	.	.	.	.
Template SS confidence
		283	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.										.	.	.	.	330	.	.	.
		707	.	.	710	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	H	P	V	R	A	P	G
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	Y	P	T	F	A	P	M
Template Known Secondary structure							S		G
Template Predicted Secondary structure
Template SS confidence
		334	.	.	.	.	.	340	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions	Phyre2 is part of Genome3D