Job Description O08908 Confidence 98.79% Date Wed Jul 10 14:15:46 BST 2013 Rank 129 Aligned Residues 66 % Identity 26% Template c1mv3A_ PDB info PDB header:endocytosis/exocytosis Chain: A: PDB Molecule:myc box dependent interacting protein 1; PDBTitle: nmr structure of the tumor suppressor bin1: alternative2 splicing in melanoma and interaction with c-myc Resolution UNK

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.			.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.
Predicted Secondary structure																																							.	.
Query SS confidence																																							.	.
Query Sequence		M	A	G	A	E	G	F	Q	Y	R	A	V	Y	P	F	R	R	E	R	P	E	D	L	E	L	L	P	G	D	L	L	V	V	S	R	V	A	.	.	L	Q	A	L	G	V	A	D	G	G	E	R	C	P	H	N	V	G	W	M	P
Query Conservation																																							.	.
Alig confidence																																							.	.			.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																											.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		L	P	P	G	F	M	F	K	V	Q	A	Q	H	D	Y	T	A	T	D	T	D	E	L	Q	L	K	A	G	D	V	V	L	V	I	P	F	Q	N	P	E	E	.	.	.	.	.	.	.	.	.	.	.	.	Q	D	E	G	W	L	M
Template Known Secondary structure				T	T								S	S		B				S	T	T				B		S	S									S		G	G	G	.	.	.	.	.	.	.	.	.	.	.	.	S		T	T
Template Predicted Secondary structure																																											.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		406	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.													.	.	.	450	.	.	.
		59	60	.									.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.
Predicted Secondary structure					.	.	.	.	.	.	.	.
Query SS confidence					.	.	.	.	.	.	.	.
Query Sequence		G	F	N	.	.	.	.	.	.	.	.	E	R	T	R	Q	R	G	D	F	P	G	T	Y	V	E	F	L
Query Conservation					.	.	.	.	.	.	.	.
Alig confidence					.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		G	V	K	E	S	D	W	N	Q	H	K	K	L	E	K	C	R	G	V	F	P	E	N	F	T	E	R	V
Template Known Secondary structure										T	G	G	G	G	G	G	T						S	T	T
Template Predicted Secondary structure
Template SS confidence
		454	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions	Phyre2 is part of Genome3D