Job Description O08908 Confidence 62.78% Date Wed Jul 10 14:15:46 BST 2013 Rank 370 Aligned Residues 181 % Identity 12% Template c1ei3C_ PDB info PDB header:blood clotting Chain: C: PDB Molecule:fibrinogen; PDBTitle: crystal structure of native chicken fibrinogen Resolution 5.50 Å

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		427	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	V	K	E	D	S	I	E	A	V	G	A	Q	L	K	V	Y	H	Q	Q	Y	Q	D	K	S	R	E	Y	D	Q	L	Y	E	E	Y	T	R	T	S	Q	E	L	Q	M	K	R	T	A	I	E	A	F	N	E	T	I	K	I	F	E
Query Conservation
Alig confidence
Template Conservation
Template Sequence		I	A	T	R	E	N	C	C	I	L	D	E	R	F	G	S	Y	C	P	T	T	C	G	I	A	D	F	F	N	K	Y	R	L	T	T	D	G	E	L	L	E	I	E	G	L	L	Q	Q	A	T	N	S	T	G	S	I	E	Y	L	I
Template Known Secondary structure															S			S	S				S
Template Predicted Secondary structure
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.
		487	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	Q	G	Q	T	Q	E	K	C	S	K	E	Y	L	E	R	F	R	R	E	G	N	E	K	E	M	Q	R	I	L	L	N	S	E	R	L	K	S	R	I	A	E	I	H	E	S	R	T	K	L	E	Q	D	L	R	A	Q	A	S	D
Query Conservation
Alig confidence								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		Q	H	I	K	T	I	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Y	P	S	E	K	Q	T	L	P	Q	S	I	E	Q	L	T	Q	K	S	K	K	I	I	E	E	I	I	R	Y	E	N	T	I	L	A	H	E	N	T
Template Known Secondary structure								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																		T	T	S	T
Template Predicted Secondary structure								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		62	.	.	.	.	.																.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.
		547	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	R	E	I	D	K	R	M	N	S	L	K	P	D	L	M	Q	L	R	K	I	R	D	Q	Y	L	V	W	L	T	Q	K	G	A	R	Q	R	K	I	N	E	W	L	G	I	K	N	E	T	E	D	Q	Y	S	L	M	E	D	E	D
Query Conservation
Alig confidence																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		I	Q	Q	L	T	D	M	H	I	M	N	S	N	K	I	T	Q	L	K	Q	K	I	A	Q	L	E	S	H	C	Q	E	P	C	K	D	T	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure																													T	T		S					S		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		107	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.
		607	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.		.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.
Predicted Secondary structure																														.
Query SS confidence																														.
Query Sequence		A	L	P	H	H	E	E	R	T	W	Y	V	G	K	I	N	R	T	Q	A	E	E	M	L	S	G	K	R	.	D	G	T	F	L	I	R	E	S	S	Q	R	G	C	Y	A	C	S	V	V	V	D
Query Conservation																														.
Alig confidence		.	.	.	.	.	.	.	.	.																				.																.	.
Template Conservation		.	.	.	.	.	.	.	.	.																																				.	.
Template Sequence		.	.	.	.	.	.	.	.	.	E	I	Q	E	T	T	G	R	D	C	Q	D	I	A	N	K	G	A	R	K	S	G	L	Y	F	I	K	P	Q	K	A	K	Q	S	F	.	.	L	V	Y	C	E
Template Known Secondary structure		.	.	.	.	.	.	.	.	.				S			B	S	S							T	T					S							S	S		S	S			.	.
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.																																				.	.
Template SS confidence
											144	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.			.	180	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions	Phyre2 is part of Genome3D