Return to main results Retrieve Phyre Job Id

Job DescriptionO08908
Confidence98.41%DateWed Jul 10 14:15:46 BST 2013
Rank236Aligned Residues63
% Identity27%Templatec1bb9A_
PDB info PDB header:transferaseChain: A: PDB Molecule:amphiphysin 2; PDBTitle: crystal structure of the sh3 domain from rat amphiphysin 2
Resolution2.20 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   7..10.........20.........30.........40.........50.........
Predicted Secondary structure 



































.......
Query SS confidence 




















































. . . . . . .
Query Sequence  FQYRAVYPFRRERPEDLELLPGDLLVVSRVALQALGVADGGERCPHNVGWMPG. . . . . . .
Query Conservation                        
   
                 
    
  
.......
Alig confidence 

































..........








.......
Template Conservation    
 


 
      


   

 
 
       ..........  



  
       
Template Sequence  FKVQAQHDYTATDTDELQLKAGDVVLVIPFQNPE. . . . . . . . . . EQDEGWLMGVKESDWN
Template Known Secondary structure  SS
B

SSTTB

B
TT


S
GG..........G

TT
Template Predicted Secondary structure 
















..........









Template SS confidence 



























































   24.....30.........40.........50....... ..60.........70...
 
   60.........70.........
Predicted Secondary structure  .













Query SS confidence  .



















Query Sequence  . FNERTRQRGDFPGTYVEFLG
Query Conservation  .      
 
 

   
    
Alig confidence  .



















Template Conservation        
  
 

 


  
 
Template Sequence  QHKELEKCRGVFPENFTERVQ
Template Known Secondary structure  TT


GGG
Template Predicted Secondary structure 











Template SS confidence 




















   74.....80.........90....
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions
Phyre2 is part of Genome3D