Job Description A0JNT9 Confidence 12.25% Date Wed Jul 10 14:25:48 BST 2013 Rank 66 Aligned Residues 299 % Identity 7% Template c4jioA_ PDB info PDB header:protein binding Chain: A: PDB Molecule:bro1; PDBTitle: bro1 v domain and ubiquitin Resolution 3.60 Å

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		147	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		H	L	E	Q	E	K	H	E	L	R	R	R	F	E	N	R	E	G	E	W	E	G	R	V	S	E	L	E	T	D	V	K	Q	L	Q	D	E	L	E	R	Q	Q	L	H	L	R	E	A	D	R	E	K	T	R	A	V	Q	E	L	S
Query Conservation
Alig confidence
Template Conservation
Template Sequence		E	I	Y	E	K	E	S	I	Y	S	E	E	K	A	Q	L	L	R	K	E	X	E	S	V	E	T	A	D	L	E	Y	T	S	F	V	E	F	T	N	L	P	K	L	I	N	D	L	A	A	A	Y	T	P	Q	L	E	X	X	R	D
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.
		207	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	Q	N	Q	R	L	L	D	Q	L	S	R	A	S	E	V	E	R	Q	L	S	M	Q	V	H	A	L	K	E	D	F	R	E	K	N	S	S	T	N	Q	H	I	I	R	L	E	S	L	Q	A	E	I	K	M	L	S	D	R	K	R
Query Conservation
Alig confidence
Template Conservation
Template Sequence		Q	I	K	S	W	A	Y	A	V	Q	Q	N	E	F	N	D	I	E	R	I	I	N	V	I	S	S	K	R	K	E	I	L	D	I	L	A	L	P	A	E	E	K	E	N	I	L	K	L	K	A	S	L	V	E	A	S	Q	S	D	E
Template Known Secondary structure													S	T	T	T	T	T		T																					S	T
Template Predicted Secondary structure
Template SS confidence
		439	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.
		267	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	L	E	H	R	L	S	A	T	L	E	E	N	D	L	L	Q	G	T	V	E	E	L	Q	D	R	V	L	I	L	E	R	Q	G	H	D	K	D	L	Q	L	H	Q	S	Q	L	E	L	Q	E	V	R	L	S	Y	R	Q	L	Q	G
Query Conservation
Alig confidence
Template Conservation
Template Sequence		K	L	F	R	L	I	K	P	Y	V	A	E	I	K	L	L	C	N	D	S	S	L	W	R	K	F	D	D	S	K	T	E	L	I	L	S	K	L	K	A	I	T	Q	F	A	E	D	L	R	L	L	K	E	E	R	A	R	T	X	G
Template Known Secondary structure				T	T	T
Template Predicted Secondary structure
Template SS confidence
		500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.
		327	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.					.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.
Predicted Secondary structure																											.	.	.	.
Query SS confidence																											.	.	.	.
Query Sequence		K	V	E	E	L	T	E	E	R	S	L	Q	S	S	A	A	T	S	T	S	L	L	S	E	I	.	.	.	.	E	Q	S	M	E	A	E	E	L	E	Q	E	R	E	Q	L	R	L	Q	L	W	E	A	Y	C	Q	V	R	Y	L	C
Query Conservation																											.	.	.	.
Alig confidence																											.	.	.	.
Template Conservation
Template Sequence		E	L	K	D	Y	V	N	N	N	D	D	I	T	S	L	L	L	A	N	K	D	K	S	D	A	E	L	Q	S	L	F	E	S	E	L	A	K	F	E	P	L	T	T	R	I	E	A	T	I	F	K	Q	G	S	T	I	N	G	V	K
Template Known Secondary structure								S	S	S				G	G	G			S	T	T			S	S	S	S	S	S								T	T	S
Template Predicted Secondary structure
Template SS confidence
		576	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.
		383	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	H	L	R	G	N	D	S	A	D	S	A	V	S	T	D	S	S	M	D	E	S	S	E	T	S	S	A	K	D	V	P	A	G	S	L	R	T	A	L	N	D	L	K	R	L	I	Q	S	I	V	D	G	V	E	P	T	V	T	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		I	E	L	D	N	I	F	G	L	T	G	I	Q	D	K	T	P	E	E	Q	K	A	E	L	E	R	K	L	F	F	D	K	L	E	E	A	T	T	K	F	T	I	F	S	S	D	I	Q	K	G	L	N	F	Y	N	S	L	L	K	X
Template Known Secondary structure												S			S																	T	T
Template Predicted Secondary structure
Template SS confidence
		636	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.
		443	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	S	V
Query Conservation
Alig confidence
Template Conservation
Template Sequence		S	K	D
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		696	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions	Phyre2 is part of Genome3D