Job Description A0JNT9 Confidence 40.43% Date Wed Jul 10 14:25:48 BST 2013 Rank 45 Aligned Residues 270 % Identity 8% Template c3r6nA_ PDB info PDB header:cell adhesion Chain: A: PDB Molecule:desmoplakin; PDBTitle: crystal structure of a rigid four spectrin repeat fragment of the2 human desmoplakin plakin domain Resolution 2.95 Å

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		47	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.						.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.
Predicted Secondary structure																														.	.	.	.	.
Query SS confidence																														.	.	.	.	.
Query Sequence		P	G	G	P	G	E	L	E	L	A	L	E	E	E	L	A	L	L	A	A	G	E	R	S	S	E	P	G	.	.	.	.	.	E	H	P	Q	A	E	P	E	S	P	V	E	G	H	G	P	P	L	P	P	P	P	T	Q	D	P	E
Query Conservation																														.	.	.	.	.
Alig confidence																														.	.	.	.	.
Template Conservation
Template Sequence		S	G	W	D	E	F	T	K	H	V	T	S	E	C	L	G	W	M	R	Q	Q	R	A	E	M	D	M	V	A	W	G	V	D	L	A	S	V	E	Q	H	I	N	S	H	R	G	I	H	N	S	I	G	D	Y	R	W	Q	L	D	K
Template Known Secondary structure				S																						T	T	S
Template Predicted Secondary structure
Template SS confidence
		178	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.
		102	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	L	S	V	I	R	Q	K	E	K	D	L	V	L	A	A	R	L	G	K	A	L	L	E	R	N	Q	D	M	S	R	Q	Y	E	Q	M	H	K	E	L	T	D	K	L	E	H	L	E	Q	E	K	H	E	L	R	R	R	F	E	N
Query Conservation
Alig confidence											.
Template Conservation											.
Template Sequence		I	K	A	D	L	R	E	K	S	.	A	I	Y	Q	L	E	E	E	Y	E	N	L	L	K	A	S	F	E	R	M	D	H	L	R	Q	L	Q	N	I	I	Q	A	T	S	R	E	I	M	W	I	N	D	C	E	E	E	E	L	L	Y
Template Known Secondary structure											.																																																	S
Template Predicted Secondary structure											.
Template SS confidence
		238	.	240	.	.	.	.	.	.		.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.
		162	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	E	G	E	W	E	G	R	V	S	E	L	E	T	D	V	K	Q	L	Q	D	E	L	E	R	Q	Q	L	H	L	R	E	A	D	R	E	K	T	R	A	V	Q	E	L	S	E	Q	N	Q	R	L	L	D	Q	L	S	R	A	S	E
Query Conservation
Alig confidence
Template Conservation
Template Sequence		D	W	S	D	K	N	T	N	I	A	Q	K	Q	E	A	F	S	I	R	M	S	Q	L	E	V	K	E	K	E	L	N	K	L	K	Q	E	S	D	Q	L	V	L	N	Q	H	P	A	S	D	K	I	E	A	Y	M	D	T	L	Q	T
Template Known Secondary structure				S	T	T				T	T																																	T	T		T	T
Template Predicted Secondary structure
Template SS confidence
		297	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.
		222	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	E	R	Q	L	S	M	Q	V	H	A	L	K	E	D	F	R	E	K	N	S	S	T	N	Q	H	I	I	R	L	E	S	L	Q	A	E	I	K	M	L	S	D	R	K	R	E	L	E	H	R	L	S	A	T	L	E	E	N	D	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		Q	W	S	W	I	L	Q	I	T	K	C	I	D	V	H	L	K	E	N	A	A	Y	F	Q	F	F	E	E	A	Q	S	T	E	A	Y	L	K	G	L	Q	D	S	I	R	K	K	Y	P	C	D	K	N	M	P	L	Q	H	L	L	E
Template Known Secondary structure																																																S				T	T
Template Predicted Secondary structure
Template SS confidence
		357	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.
		282	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	Q	G	T	V	E	E	L	Q	D	R	V	L	I	L	E	R	Q	G	H	D	K	D	L	Q	L	H	Q	S	Q	L	E	L	Q	E	V
Query Conservation
Alig confidence
Template Conservation
Template Sequence		Q	I	K	E	L	E	K	E	R	E	K	I	L	E	Y	K	R	Q	V	Q	N	L	V	N	K	S	K	K	I	V	Q	L	K	P	R	N
Template Known Secondary structure																												T	T					G	G	G	S
Template Predicted Secondary structure
Template SS confidence
		417	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions	Phyre2 is part of Genome3D