Job Description A0JNT9 Confidence 61.78% Date Wed Jul 10 14:25:48 BST 2013 Rank 37 Aligned Residues 189 % Identity 10% Template c3na7A_ PDB info PDB header:gene regulation, chaperone Chain: A: PDB Molecule:hp0958; PDBTitle: 2.2 angstrom structure of the hp0958 protein from helicobacter pylori2 ccug 17874 Resolution 2.20 Å Model Dimensions (Å) X:69.568 Y:101.884 Z:43.320

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		375	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Y	C	Q	V	R	Y	L	C	S	H	L	R	G	N	D	S	A	D	S	A	V	S	T	D	S	S	M	D	E	S	S	E	T	S	S	A	K	D	V	P	A	G	S	L	R	T	A	L	N	D	L	K	R	L	I	Q	S	I	V	D
Query Conservation
Alig confidence
Template Conservation
Template Sequence		N	T	H	L	K	Q	L	I	E	I	S	H	L	D	K	E	I	D	S	L	E	P	L	I	R	E	K	R	K	D	L	D	K	A	L	N	D	K	E	A	K	N	K	A	I	L	N	L	E	E	E	K	L	A	L	K	L	Q	V	S
Template Known Secondary structure																					T
Template Predicted Secondary structure
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.
		435	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	V	E	P	T	V	T	L	L	S	V	E	M	T	A	L	K	E	E	R	D	R	L	R	V	T	S	E	D	K	E	P	K	E	Q	L	Q	K	A	I	R	D	R	D	E	A	I	A	K	K	N	A	V	E	L	E	L	A	K	C
Query Conservation
Alig confidence
Template Conservation
Template Sequence		K	N	E	Q	T	L	Q	D	T	N	A	K	I	A	S	I	Q	K	K	M	S	E	I	K	S	E	R	E	L	R	S	L	N	I	E	E	D	I	A	K	E	R	S	N	Q	A	N	R	E	I	E	N	L	Q	N	E	I	K	R	K
Template Known Secondary structure																									S	S	S	S
Template Predicted Secondary structure
Template SS confidence
		62	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.
		495	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	M	D	M	M	S	L	N	S	Q	L	L	D	A	I	Q	Q	K	L	N	L	S	Q	Q	L	E	A	W	Q	D	D	M	H	R	V	I	D	R	Q	L	M	D	T	H	L	K	E	Q	S	R	P	A	A	A	A	F	P	R	G	H
Query Conservation
Alig confidence																																						.
Template Conservation																																						.
Template Sequence		S	E	K	Q	E	D	L	K	K	E	M	L	E	L	E	K	L	A	L	E	L	E	S	L	V	E	N	E	V	K	N	I	K	E	T	Q	.	Q	I	I	F	K	K	K	E	D	L	V	E	K	T	E	P	K	I	Y	S	F	Y	E
Template Known Secondary structure																																						.													T	S
Template Predicted Secondary structure																																						.
Template SS confidence
		122	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.		.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180
		555	.	.	.	.	560	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	V	G	R	G	Q	E	P	S	T
Query Conservation
Alig confidence
Template Conservation
Template Sequence		R	I	R	R	W	A	K	N	T	S
Template Known Secondary structure								G	G	G	S
Template Predicted Secondary structure
Template SS confidence
		181	.	.	.	.	.	.	.	.	190

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions	Phyre2 is part of Genome3D