Job Description A0JNT9 Confidence 19.63% Date Wed Jul 10 14:25:48 BST 2013 Rank 52 Aligned Residues 67 % Identity 13% Template c3a7pB_ PDB info PDB header:protein transport Chain: B: PDB Molecule:autophagy protein 16; PDBTitle: the crystal structure of saccharomyces cerevisiae atg16 Resolution 2.80 Å

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		466	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	K	E	Q	L	Q	K	A	I	R	D	R	D	E	A	I	A	K	K	N	A	V	E	L	E	L	A	K	C	K	M	D	M	M	S	L	N	S	Q	L	L	D	A	I	Q	Q	K	L	N	L	S	Q	Q	L	E	A	W	Q	D	D
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	L	N	T	L	A	I	L	Q	K	E	L	K	S	K	E	Q	E	I	R	R	L	K	E	V	I	A	L	K	N	K	N	T	E	R	L	N	A	A	L	I	S	G	T	I	E	N	N	V	L	Q	Q	K	L	S	D	L	K	K	E
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		64	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.
		526	.	.	.	530	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		M	H	R	V	I	D	R
Query Conservation
Alig confidence
Template Conservation
Template Sequence		H	S	Q	L	V	A	R
Template Known Secondary structure							G	G
Template Predicted Secondary structure
Template SS confidence
		124	.	.	.	.	.	130

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions	Phyre2 is part of Genome3D