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Job DescriptionA0JNT9
Confidence9.84%DateWed Jul 10 14:25:48 BST 2013
Rank74Aligned Residues96
% Identity9%Templatec2wpqA_
PDB info PDB header:membrane proteinChain: A: PDB Molecule:trimeric autotransporter adhesin fragment; PDBTitle: salmonella enterica sada 479-519 fused to gcn4 adaptors (2 sadak3, in-register fusion)
Resolution1.85 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   434.....440.........450.........460.........470.........480.........490...
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Query Sequence  DGVEPTVTLLSVEMTALKEERDRLRVTSEDKEPKEQLQKAIRDRDEAIAKKNAVELELAK
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Template Sequence  KQIEDKIEEILSKIYHIENEIARI. . KKLIFDTNEKVDQNTADITTNTNSINQNTTDIAT
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   451........460.........470.... .....480.........490.........500........
 
   494.....500.........510.........520.........530.
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Query Sequence  CKMDMMSLNSQLLDAIQQKLNLSQQLEAWQDDMHRVID
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Template Sequence  NTTNINNLSDSMKQIEDKIEEILSKIYHIENEIARIKK
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   509510.........520.........530.........540......
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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