Job Description A0JNT9 Confidence 52.48% Date Wed Jul 10 14:25:48 BST 2013
Rank 40 Aligned Residues 97
% Identity 22% Template c2qa7C_
PDB info
PDB header: actin bindingChain: C: PDB Molecule: huntingtin-interacting protein 1;
PDBTitle: crystal structure of huntingtin-interacting protein 12 (hip1) coiled-coil domain with a basic surface suitable3 for hip-protein interactor (hippi)
Resolution 2.80 Å
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Show / Hide Conservation and Alignment quality
   
140 . . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . .
Predicted Secondary structure  
Query SS confidence  
Query Sequence  
E L T D K L E H L E Q E K H E L R R R F E N R E G E W E G R V S E L E T D V K Q L Q D E L E R Q Q L H L R E A D R E K T
Query Conservation  
                                                                                                   
Alig confidence  
Template Conservation  
                                                                                   
Template Sequence  
E K D H L I E R L Y R E I S G L K A Q L E N M K T E S Q R V V L Q L K G H V S E L E A D L A E Q Q H L R Q Q A A D D C E
Template Known Secondary structure  
T
Template Predicted Secondary structure  
Template SS confidence  
   
372 . . . . . . . 380 . . . . . . . . . 390 . . . . . . . . . 400 . . . . . . . . . 410 . . . . . . . . . 420 . . . . . . . . . 430 .
 
   
200 . . . . . . . . . 210 . . . . . . . . . 220 . . . . . . . . . 230 . . . . . . .
Predicted Secondary structure  
Query SS confidence  
Query Sequence  
R A V Q E L S E Q N Q R L L D Q L S R A S E V E R Q L S M Q V H A L K E D F
Query Conservation  
                                                                       
Alig confidence  
.
Template Conservation  
                  .                                  
Template Sequence  
F L R A E L D E L R R Q R .
E D T E K A Q R S L S E I E R K A Q A N E Q R Y
Template Known Secondary structure  
.
Template Predicted Secondary structure  
.
Template SS confidence  
   
432 . . . . . . . 440 . . . .
. . . . . 450 . . . . . . . . . 460 . . . . . . . .
 
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf ] [Import into BibTeX ]
 
Phyre2 is part of Genome3D