Job Description A0JNT9 Confidence 65.51% Date Wed Jul 10 14:25:48 BST 2013 Rank 35 Aligned Residues 152 % Identity 11% Template c1y4cA_ PDB info PDB header:de novo protein Chain: A: PDB Molecule:maltose binding protein fused with designed PDBTitle: designed helical protein fusion mbp Resolution 1.90 Å

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		26	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	P	A	G	A	G	D	A	V	R	S	P	A	T	A	A	A	L	V	S	F	P	G	G	P	G	E	L	E	L	A	L	E	E	E	L	A	L	L	A	A	G	E	R	S	S	E	P	G	E	H	P	Q	A	E	P	E	S	P	V
Query Conservation
Alig confidence
Template Conservation
Template Sequence		M	P	N	I	P	Q	M	S	A	F	W	Y	A	V	R	T	A	V	I	N	A	A	S	G	R	Q	T	V	D	E	A	L	K	D	A	Q	T	N	S	S	S	L	G	I	E	G	R	S	S	E	E	L	L	K	I	A	L	Q	E	A
Template Known Secondary structure					S	T	T																		T	S	S
Template Predicted Secondary structure
Template SS confidence
		330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.
		86	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	G	H	G	P	P	L	P	P	P	P	T	Q	D	P	E	L	L	S	V	I	R	Q	K	E	K	D	L	V	L	A	A	R	L	G	K	A	L	L	E	R	N	Q	D	M	S	R	Q	Y	E	Q	M	H	K	E	L	T	D	K	L
Query Conservation
Alig confidence																																											.	.	.	.	.
Template Conservation																																											.	.	.	.	.
Template Sequence		Q	K	T	L	Q	Q	A	Q	E	L	A	K	K	G	G	G	E	E	Q	L	K	R	A	L	K	R	A	D	R	N	L	W	A	A	Q	E	L	A	K	K	G	.	.	.	.	.	G	G	G	E	E	L	L	K	Q	A	L	Q	Q	A
Template Known Secondary structure														S	S																										T	T	.	.	.	.	.		T	T
Template Predicted Secondary structure																																											.	.	.	.	.
Template SS confidence
		560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600						.	.	.	.	.	.	.	.	.	610	.	.	.	.
		146	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	H	L	E	Q	E	K	H	E	L	R	R	R	F	E	N	R	E	G	E	W	E	G	R	V	S	E	L	E	T	D	V	K	Q	L	Q	D	E	L	E	R	Q
Query Conservation
Alig confidence																		.	.	.	.	.
Template Conservation																		.	.	.	.	.
Template Sequence		Q	Q	L	L	R	Q	A	Q	E	L	A	K	K	G	G	G	.	.	.	.	.	E	E	L	L	K	Q	A	L	Q	Q	A	Q	Q	L	L	Q	Q	A	Q	E	L
Template Known Secondary structure																S		.	.	.	.	.
Template Predicted Secondary structure																		.	.	.	.	.
Template SS confidence
		615	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630						.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions	Phyre2 is part of Genome3D