Job Description A0JNT9 Confidence 75.75% Date Wed Jul 10 14:25:48 BST 2013 Rank 23 Aligned Residues 139 % Identity 6% Template c1deqD_ PDB info PDB header:blood clotting Chain: D: PDB Molecule:fibrinogen (alpha chain); PDBTitle: the crystal structure of modified bovine fibrinogen (at ~42 angstrom resolution) Resolution 3.50 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		155	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	R	R	R	F	E	N	R	E	G	E	W	E	G	R	V	S	E	L	E	T	D	V	K	Q	L	Q	D	E	L	E	R	Q	Q	L	H	L	R	E	A	D	R	E	K	T	R	A	V	Q	E	L	S	E	Q	N	Q	R	L	L	D
Query Conservation
Alig confidence
Template Conservation
Template Sequence		M	K	G	L	I	D	E	V	D	Q	D	F	T	S	R	I	N	K	L	R	D	S	L	F	N	Y	Q	K	N	S	K	D	S	N	T	L	T	K	N	I	V	E	L	M	R	G	D	F	A	K	A	N	N	N	D	N	T	F	K	Q
Template Known Secondary structure							T	T	S	S								T	T	G	G	G	S							T	T	S	S	S								T	T	T	T
Template Predicted Secondary structure
Template SS confidence
		54	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.
		215	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	L	S	R	A	S	E	V	E	R	Q	L	S	M	Q	V	H	A	L	K	E	D	F	R	E	K	N	S	S	T	N	Q	H	I	I	R	L	E	S	L	Q	A	E	I	K	M	L	S	D	R	K	R	E	L	E	H	R	L	S	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		I	N	E	D	L	R	S	R	I	E	I	L	R	R	K	V	I	E	Q	V	Q	R	I	N	L	L	Q	K	N	V	R	D	Q	L	V	D	M	K	R	L	E	V	D	I	D	I	K	I	R	S	C	K	G	S	C	S	R	A	L	E
Template Known Secondary structure																																																						T	T	S	S
Template Predicted Secondary structure
Template SS confidence
		114	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.
		275	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	L	E	E	N	D	L	L	Q	G	T	V	E	E	L	Q	D	R	V
Query Conservation
Alig confidence
Template Conservation
Template Sequence		H	K	V	D	L	E	D	Y	K	N	Q	Q	K	Q	L	E	Q	V	I
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		174	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions	Phyre2 is part of Genome3D