Job Description A0JNT9 Confidence 97.16% Date Wed Jul 10 14:25:48 BST 2013 Rank 3 Aligned Residues 284 % Identity 14% Template c1c1gA_ PDB info PDB header:contractile protein Chain: A: PDB Molecule:tropomyosin; PDBTitle: crystal structure of tropomyosin at 7 angstroms resolution2 in the spermine-induced crystal form Resolution 7.00 Å Model Dimensions (Å) X:414.873 Y:51.332 Z:62.866

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		244	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	N	Q	H	I	I	R	L	E	S	L	Q	A	E	I	K	M	L	S	D	R	K	R	E	L	E	H	R	L	S	A	T	L	E	E	N	D	L	L	Q	G	T	V	E	E	L	Q	D	R	V	L	I	L	E	R	Q	G	H	D	K
Query Conservation
Alig confidence
Template Conservation
Template Sequence		M	D	A	I	K	K	K	M	Q	M	L	K	L	D	K	E	N	A	L	D	R	A	D	E	A	E	A	D	K	K	A	A	E	D	R	S	K	Q	L	E	D	E	L	V	S	L	Q	K	K	L	K	A	T	E	D	E	L	D	K	Y
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60
		304	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	L	Q	L	H	Q	S	Q	L	E	L	Q	E	V	R	L	S	Y	R	Q	L	Q	G	K	V	E	E	L	T	E	E	R	S	L	Q	S	S	A	A	T	S	T	S	L	L	S	E	I	E	Q	S	M	E	A	E	E	L	E	Q	E
Query Conservation
Alig confidence
Template Conservation
Template Sequence		S	E	A	L	K	D	A	Q	E	K	L	E	L	A	E	K	K	A	T	D	A	E	A	D	V	A	S	L	N	R	R	I	Q	L	F	E	E	E	L	D	R	A	Q	E	R	L	A	T	A	L	Q	K	L	E	E	A	E	K	A	A
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		61	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120
		364	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	E	Q	L	R	L	Q	L	W	E	A	Y	C	Q	V	R	Y	L	C	S	H	L	R	G	N	D	S	A	D	S	A	V	S	T	D	S	S	M	D	E	S	S	E	T	S	S	A	K	D	V	P	A	G	S	L	R	T	A	L	N
Query Conservation
Alig confidence
Template Conservation
Template Sequence		D	E	S	E	R	G	M	K	V	I	E	S	R	A	Q	K	D	E	E	K	M	E	I	Q	E	I	Q	L	K	E	A	K	H	I	A	E	D	A	D	R	K	Y	E	E	V	A	R	K	L	V	I	I	E	S	D	L	E	R	A	E
Template Known Secondary structure																																															T
Template Predicted Secondary structure
Template SS confidence
		121	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180
		424	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	L	K	R	L	I	Q	S	I	V	D	G	V	E	P	T	V	T	L	L	S	V	E	M	T	A	L	K	E	E	R	D	R	L	R	V	T	S	E	D	K	E	P	K	E	Q	L	Q	K	A	I	R	D	R	D	E	A	I	A	K
Query Conservation
Alig confidence																																													.	.
Template Conservation																																													.	.
Template Sequence		E	R	A	E	L	S	E	G	K	C	A	E	L	E	E	E	I	K	T	V	T	N	N	L	K	S	L	E	A	Q	A	E	K	Y	S	Q	K	E	D	K	Y	E	E	.	.	E	I	K	V	L	S	D	K	L	K	E	A	E	T	R
Template Known Secondary structure																																													.	.
Template Predicted Secondary structure																																													.	.
Template SS confidence
		181	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.			.	.	.	.	.	.	230	.	.	.	.	.	.	.	.
		484	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	N	A	V	E	L	E	L	A	K	C	K	M	D	M	M	S	L	N	S	Q	L	L	D	A	I	Q	Q	K	L	N	L	S	Q	Q	L	E	A	W	Q	D	D	M	H	R	V
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	E	F	A	E	R	S	V	T	K	L	E	K	S	I	D	D	L	E	D	E	L	Y	A	Q	K	L	K	Y	K	A	I	S	E	E	L	D	H	A	L	N	D	M	T	S	I
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		239	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions	Phyre2 is part of Genome3D