Return to main results Retrieve Phyre Job Id

Job DescriptionQ64010
Confidence99.76%DateWed Jul 10 14:42:12 BST 2013
Rank74Aligned Residues103
% Identity29%Templatec2kk6A_
PDB info PDB header:transferaseChain: A: PDB Molecule:proto-oncogene tyrosine-protein kinase fer; PDBTitle: solution structure of sh2 domain of proto-oncogene tyrosine-2 protein kinase fer from homo sapiens, northeast structural3 genomics consortium (nesg) target hr3461d
ResolutionUNK

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   3......10.........20.........30.........40.........50.........60..
Predicted Secondary structure 































Query SS confidence 



























































Query Sequence  GNFDSEERSSWYWGRLSRQEAVALLQGQRHGVFLVRDSSTSPGDYVLSVSENSRVSHYII
Query Conservation            
  
   
  

  
     
 



 
    
   

      
 
  
Alig confidence 


























..






























Template Conservation 
    
    



 


  

 

  .. 
 



 
        

      
 
  
Template Sequence  SHMKPLAEQDWYHGAIPRIEAQELLKK. . QGDFLVRESHGKPGEYVLSVYSDGQRRHFII
Template Known Secondary structure  SS


TTT
TTS

T

S..TT

TT
TT
TT
Template Predicted Secondary structure 













..












Template SS confidence 



























































   910.........20.........30..... ....40.........50.........60......
 
   63......70.........80.........90.........100......... 110.......
Predicted Secondary structure 






























.....







Query SS confidence 














































. . . . .







Query Sequence  NSSGPRPPVPPSPAQPPPGVSPSRLRIGDQEFDSLPALLEFYKIHYL. . . . . DTTTLIEP
Query Conservation                                 
 

  

  
     .....    
  
Alig confidence 





..................






















.....







Template Conservation        ..................
      
 

 


  
              
  
Template Sequence  QYVDNM. . . . . . . . . . . . . . . . . . YRFEGTGFSNIPQLIDHHYTTKQVITKKSGVVLLNP
Template Known Secondary structure  TT..................SSS
S
TT

S
TTTT



S
Template Predicted Secondary structure 



..................



















Template SS confidence 



























































   67..70.. .......80.........90.........100........
 
   118.120.....
Predicted Secondary structure 







Query SS confidence 







Query Sequence  VARSRQGS
Query Conservation          
Alig confidence 







Template Conservation 
 
   
 
Template Sequence  IPKDKKWI
Template Known Secondary structure 







Template Predicted Secondary structure 







Template SS confidence 







   109110......
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions
Phyre2 is part of Genome3D