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Job DescriptionQ64010
Confidence99.62%DateWed Jul 10 14:42:12 BST 2013
Rank166Aligned Residues58
% Identity26%Templatec2ke9A_
PDB info PDB header:protein bindingChain: A: PDB Molecule:caskin-2; PDBTitle: nmr solution structure of the caskin sh3 domain
ResolutionUNK

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   240........ .250.........260.........270.........280 .........290..
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Query Sequence  ARVIQKRVP. NAYDKTALALEVGELVKVTKINVSGQWEGECN. . . . . . GKRGHFPFTHVR
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Template Sequence  LKVRALKDFWNLHDPTALNVRAGDVITVLEQHPDGRWKGHIHESQRGTDRIGYFPPGIVE
Template Known Secondary structure  SS
B


S
TTB

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TT
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SS
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GGG
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   284.....290.........300.........310.........320.........330.........340...
 
   293....
Predicted Secondary structure 



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Query Sequence  LLDQQ
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Template Sequence  VVSKR
Template Known Secondary structure  SS


Template Predicted Secondary structure 


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   344....
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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